Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 WHAMMP2-203ENST00000563942 1603 ntBASIC13.61□□□□□ -0.23
SVIPQ8NHG7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 CR383656.2-201ENST00000548656 2254 ntBASIC13.61□□□□□ -0.23
SVIPQ8NHG7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.61□□□□□ -0.23
SVIPQ8NHG7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SVIPQ8NHG7 AC018470.1-201ENST00000624790 3129 ntBASIC13.59□□□□□ -0.23
SVIPQ8NHG7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 PCDHB18P-201ENST00000524813 2368 ntBASIC13.59□□□□□ -0.23
SVIPQ8NHG7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SVIPQ8NHG7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
SVIPQ8NHG7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.58□□□□□ -0.23
SVIPQ8NHG7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.58□□□□□ -0.24
SVIPQ8NHG7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SVIPQ8NHG7 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
SVIPQ8NHG7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
SVIPQ8NHG7 AC233723.2-201ENST00000623798 2106 ntBASIC13.57□□□□□ -0.24
SVIPQ8NHG7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SVIPQ8NHG7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
SVIPQ8NHG7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SVIPQ8NHG7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SVIPQ8NHG7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SVIPQ8NHG7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms