Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.68■■□□□ 1.86
SMC5Q8IY18 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.68■■□□□ 1.86
SMC5Q8IY18 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.68■■□□□ 1.86
SMC5Q8IY18 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMC5Q8IY18 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMC5Q8IY18 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMC5Q8IY18 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMC5Q8IY18 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMC5Q8IY18 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.67■■□□□ 1.86
SMC5Q8IY18 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SMC5Q8IY18 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMC5Q8IY18 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SMC5Q8IY18 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
SMC5Q8IY18 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SMC5Q8IY18 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SMC5Q8IY18 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SMC5Q8IY18 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.67■■□□□ 1.86
SMC5Q8IY18 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.67■■□□□ 1.86
SMC5Q8IY18 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMC5Q8IY18 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMC5Q8IY18 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.66■■□□□ 1.86
SMC5Q8IY18 AC024257.2-201ENST00000549699 147 ntBASIC26.66■■□□□ 1.86
SMC5Q8IY18 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMC5Q8IY18 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMC5Q8IY18 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMC5Q8IY18 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMC5Q8IY18 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMC5Q8IY18 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.65■■□□□ 1.86
SMC5Q8IY18 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.65■■□□□ 1.86
SMC5Q8IY18 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMC5Q8IY18 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMC5Q8IY18 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.65■■□□□ 1.86
SMC5Q8IY18 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.65■■□□□ 1.86
SMC5Q8IY18 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.65■■□□□ 1.86
SMC5Q8IY18 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SMC5Q8IY18 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.65■■□□□ 1.86
SMC5Q8IY18 AC005229.4-201ENST00000610085 2198 ntBASIC26.65■■□□□ 1.86
SMC5Q8IY18 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.65■■□□□ 1.86
SMC5Q8IY18 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMC5Q8IY18 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMC5Q8IY18 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMC5Q8IY18 PALM-208ENST00000592155 2272 ntTSL 4 BASIC26.64■■□□□ 1.86
SMC5Q8IY18 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.64■■□□□ 1.86
SMC5Q8IY18 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMC5Q8IY18 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
SMC5Q8IY18 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
SMC5Q8IY18 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.64■■□□□ 1.86
SMC5Q8IY18 AC131212.1-201ENST00000613771 668 ntBASIC26.64■■□□□ 1.86
SMC5Q8IY18 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMC5Q8IY18 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SMC5Q8IY18 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SMC5Q8IY18 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SMC5Q8IY18 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.64■■□□□ 1.85
SMC5Q8IY18 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMC5Q8IY18 AP004607.7-201ENST00000527152 1677 ntBASIC26.63■■□□□ 1.85
SMC5Q8IY18 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.63■■□□□ 1.85
SMC5Q8IY18 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.63■■□□□ 1.85
SMC5Q8IY18 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMC5Q8IY18 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMC5Q8IY18 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMC5Q8IY18 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.63■■□□□ 1.85
SMC5Q8IY18 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SMC5Q8IY18 AL034346.1-201ENST00000568244 1277 ntBASIC26.63■■□□□ 1.85
SMC5Q8IY18 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SMC5Q8IY18 AL136162.1-201ENST00000607711 1078 ntBASIC26.63■■□□□ 1.85
SMC5Q8IY18 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.63■■□□□ 1.85
SMC5Q8IY18 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.63■■□□□ 1.85
SMC5Q8IY18 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMC5Q8IY18 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.62■■□□□ 1.85
SMC5Q8IY18 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 AC003102.1-202ENST00000563394 1796 ntBASIC26.62■■□□□ 1.85
SMC5Q8IY18 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.62■■□□□ 1.85
SMC5Q8IY18 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.62■■□□□ 1.85
SMC5Q8IY18 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.62■■□□□ 1.85
SMC5Q8IY18 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.62■■□□□ 1.85
SMC5Q8IY18 FEM1AP4-201ENST00000443167 1987 ntBASIC26.62■■□□□ 1.85
SMC5Q8IY18 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
SMC5Q8IY18 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
SMC5Q8IY18 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMC5Q8IY18 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 SMUG1P1-201ENST00000590640 811 ntBASIC26.61■■□□□ 1.85
SMC5Q8IY18 AC233992.3-201ENST00000607491 485 ntBASIC26.61■■□□□ 1.85
SMC5Q8IY18 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms