Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC055733.4-201ENST00000638462 1354 ntBASIC20.46■□□□□ 0.87
GABREP78334 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.46■□□□□ 0.87
GABREP78334 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.46■□□□□ 0.87
GABREP78334 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.46■□□□□ 0.87
GABREP78334 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
GABREP78334 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.46■□□□□ 0.87
GABREP78334 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.46■□□□□ 0.87
GABREP78334 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 KRT18P20-201ENST00000548986 1279 ntBASIC20.46■□□□□ 0.87
GABREP78334 ITM2C-210ENST00000620962 501 ntBASIC20.46■□□□□ 0.87
GABREP78334 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
GABREP78334 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABREP78334 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
GABREP78334 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABREP78334 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABREP78334 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABREP78334 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABREP78334 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.45■□□□□ 0.86
GABREP78334 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABREP78334 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.45■□□□□ 0.86
GABREP78334 AC138907.5-202ENST00000569484 235 ntBASIC20.45■□□□□ 0.86
GABREP78334 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.45■□□□□ 0.86
GABREP78334 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABREP78334 AC013268.1-206ENST00000638368 961 ntBASIC20.45■□□□□ 0.86
GABREP78334 AC112229.1-201ENST00000639295 961 ntBASIC20.45■□□□□ 0.86
GABREP78334 AC004812.2-201ENST00000611079 2094 ntBASIC20.45■□□□□ 0.86
GABREP78334 DUSP8P5-201ENST00000422884 1815 ntBASIC20.45■□□□□ 0.86
GABREP78334 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.45■□□□□ 0.86
GABREP78334 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
GABREP78334 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABREP78334 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.44■□□□□ 0.86
GABREP78334 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.44■□□□□ 0.86
GABREP78334 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABREP78334 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
GABREP78334 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GABREP78334 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABREP78334 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.44■□□□□ 0.86
GABREP78334 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABREP78334 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
GABREP78334 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABREP78334 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABREP78334 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.43■□□□□ 0.86
GABREP78334 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.43■□□□□ 0.86
GABREP78334 CYP2T1P-201ENST00000432607 1285 ntBASIC20.43■□□□□ 0.86
GABREP78334 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GABREP78334 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.43■□□□□ 0.86
GABREP78334 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.43■□□□□ 0.86
GABREP78334 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.43■□□□□ 0.86
GABREP78334 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
GABREP78334 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABREP78334 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABREP78334 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABREP78334 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
GABREP78334 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABREP78334 MKRN4P-201ENST00000444706 1521 ntBASIC20.42■□□□□ 0.86
GABREP78334 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
GABREP78334 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABREP78334 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABREP78334 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.41■□□□□ 0.86
GABREP78334 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
GABREP78334 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.41■□□□□ 0.86
GABREP78334 MIPEPP3-201ENST00000412105 444 ntBASIC20.41■□□□□ 0.86
GABREP78334 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.41■□□□□ 0.86
GABREP78334 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.41■□□□□ 0.86
GABREP78334 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.41■□□□□ 0.86
GABREP78334 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.41■□□□□ 0.86
GABREP78334 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
GABREP78334 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
GABREP78334 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.41■□□□□ 0.86
GABREP78334 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.41■□□□□ 0.86
GABREP78334 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABREP78334 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABREP78334 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GABREP78334 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABREP78334 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABREP78334 TERF1P5-201ENST00000477545 1207 ntBASIC20.4■□□□□ 0.86
GABREP78334 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
GABREP78334 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABREP78334 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
GABREP78334 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABREP78334 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
GABREP78334 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABREP78334 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms