Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.54■■□□□ 1.04
RFPL1O75677 AL031602.1-201ENST00000633169 911 ntBASIC21.54■■□□□ 1.04
RFPL1O75677 AC026471.6-201ENST00000622954 1905 ntBASIC21.54■■□□□ 1.04
RFPL1O75677 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.54■■□□□ 1.04
RFPL1O75677 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL1O75677 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL1O75677 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RFPL1O75677 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL1O75677 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL1O75677 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL1O75677 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL1O75677 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL1O75677 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.53■■□□□ 1.04
RFPL1O75677 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL1O75677 SUDS3P1-201ENST00000505831 966 ntBASIC21.53■■□□□ 1.04
RFPL1O75677 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.53■■□□□ 1.04
RFPL1O75677 AL031432.3-201ENST00000607698 485 ntBASIC21.53■■□□□ 1.04
RFPL1O75677 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.53■■□□□ 1.04
RFPL1O75677 FEM1AP4-201ENST00000443167 1987 ntBASIC21.53■■□□□ 1.04
RFPL1O75677 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL1O75677 AF106564.1-201ENST00000607058 2553 ntBASIC21.53■■□□□ 1.04
RFPL1O75677 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RFPL1O75677 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL1O75677 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RFPL1O75677 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
RFPL1O75677 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL1O75677 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.52■■□□□ 1.04
RFPL1O75677 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL1O75677 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
RFPL1O75677 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL1O75677 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
RFPL1O75677 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL1O75677 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RFPL1O75677 AL355001.2-201ENST00000620617 1191 ntBASIC21.52■■□□□ 1.04
RFPL1O75677 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL1O75677 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.52■■□□□ 1.04
RFPL1O75677 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RFPL1O75677 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL1O75677 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
RFPL1O75677 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFPL1O75677 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.52■■□□□ 1.03
RFPL1O75677 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
RFPL1O75677 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RFPL1O75677 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.51■■□□□ 1.03
RFPL1O75677 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 AC024257.2-201ENST00000549699 147 ntBASIC21.51■■□□□ 1.03
RFPL1O75677 AC092666.2-201ENST00000613287 246 ntBASIC21.51■■□□□ 1.03
RFPL1O75677 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.51■■□□□ 1.03
RFPL1O75677 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RFPL1O75677 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
RFPL1O75677 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.51■■□□□ 1.03
RFPL1O75677 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL1O75677 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RFPL1O75677 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RFPL1O75677 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.5■■□□□ 1.03
RFPL1O75677 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.5■■□□□ 1.03
RFPL1O75677 AC079089.2-201ENST00000531211 1277 ntBASIC21.5■■□□□ 1.03
RFPL1O75677 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.5■■□□□ 1.03
RFPL1O75677 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.5■■□□□ 1.03
RFPL1O75677 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.5■■□□□ 1.03
RFPL1O75677 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL1O75677 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.49■■□□□ 1.03
RFPL1O75677 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL1O75677 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.49■■□□□ 1.03
RFPL1O75677 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL1O75677 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL1O75677 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.49■■□□□ 1.03
RFPL1O75677 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL1O75677 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.49■■□□□ 1.03
RFPL1O75677 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL1O75677 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL1O75677 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL1O75677 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.48■■□□□ 1.03
RFPL1O75677 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RFPL1O75677 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RFPL1O75677 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.48■■□□□ 1.03
RFPL1O75677 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RFPL1O75677 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
RFPL1O75677 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL1O75677 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL1O75677 AC026271.2-201ENST00000428091 497 ntBASIC21.48■■□□□ 1.03
RFPL1O75677 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL1O75677 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL1O75677 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
RFPL1O75677 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms