Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.07■□□□□ 0
TRAV12-1A0A0B4J245 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 LINC01529-204ENST00000636474 1715 ntBASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 AC104564.3-201ENST00000582367 638 ntBASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.06■□□□□ 0
TRAV12-1A0A0B4J245 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-1A0A0B4J245 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-1A0A0B4J245 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-1A0A0B4J245 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRAV12-1A0A0B4J245 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV12-1A0A0B4J245 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 AC009086.3-201ENST00000623486 1008 ntBASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TRAV12-1A0A0B4J245 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 AL391422.3-201ENST00000603791 2761 ntBASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV12-1A0A0B4J245 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 FP325331.1-202ENST00000623531 1380 ntBASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV12-1A0A0B4J245 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.02■□□□□ -0
TRAV12-1A0A0B4J245 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms