Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 SMG8-203ENST00000578922 2178 ntBASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.96■□□□□ 0.31
SMCO4Q9NRQ5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.96■□□□□ 0.3
SMCO4Q9NRQ5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.96■□□□□ 0.3
SMCO4Q9NRQ5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMCO4Q9NRQ5 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.96■□□□□ 0.3
SMCO4Q9NRQ5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.96■□□□□ 0.3
SMCO4Q9NRQ5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMCO4Q9NRQ5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMCO4Q9NRQ5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SMCO4Q9NRQ5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.93■□□□□ 0.3
SMCO4Q9NRQ5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO4Q9NRQ5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
SMCO4Q9NRQ5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SMCO4Q9NRQ5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO4Q9NRQ5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.92■□□□□ 0.3
SMCO4Q9NRQ5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO4Q9NRQ5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO4Q9NRQ5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms