Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 YBX1P4-201ENST00000392794 808 ntBASIC20.8■□□□□ 0.92
HIPK4Q8NE63 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIPK4Q8NE63 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HIPK4Q8NE63 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 AC144652.1-201ENST00000609974 1624 ntBASIC20.78■□□□□ 0.92
HIPK4Q8NE63 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 AC103724.3-201ENST00000564481 992 ntBASIC20.78■□□□□ 0.92
HIPK4Q8NE63 AL033527.3-201ENST00000566366 1196 ntBASIC20.78■□□□□ 0.92
HIPK4Q8NE63 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIPK4Q8NE63 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 AC137630.3-201ENST00000607245 391 ntBASIC20.77■□□□□ 0.92
HIPK4Q8NE63 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIPK4Q8NE63 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
HIPK4Q8NE63 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
HIPK4Q8NE63 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HIPK4Q8NE63 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HIPK4Q8NE63 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 KRT8P33-201ENST00000508125 1423 ntBASIC20.76■□□□□ 0.91
HIPK4Q8NE63 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIPK4Q8NE63 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 Z98882.1-201ENST00000622160 2253 ntBASIC20.75■□□□□ 0.91
HIPK4Q8NE63 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIPK4Q8NE63 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIPK4Q8NE63 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms