Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.522e-6■■■□□ 18.5
EWSR1Q01844 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.172e-6■■■□□ 18.5
EWSR1Q01844 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.052e-6■■■□□ 18.5
EWSR1Q01844 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.072e-6■■■□□ 18.5
EWSR1Q01844 MSH6-202ENST00000411819 548 ntTSL 416.49■□□□□ 0.233e-9■■■□□ 18.5
EWSR1Q01844 U52111.1-202ENST00000416854 244 ntTSL 512.84□□□□□ -0.352e-6■■■□□ 18.5
EWSR1Q01844 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.84□□□□□ -0.512e-6■■■□□ 18.5
EWSR1Q01844 ACVR2B-203ENST00000465020 1666 ntTSL 214.48□□□□□ -0.091e-6■■■□□ 18.5
EWSR1Q01844 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.91e-6■■■□□ 18.5
EWSR1Q01844 PFKL-207ENST00000474114 6007 ntTSL 1 (best)16.33■□□□□ 0.27e-7■■■□□ 18.5
EWSR1Q01844 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC9.79□□□□□ -0.848e-9■■■□□ 18.5
EWSR1Q01844 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.362e-6■■■□□ 18.5
EWSR1Q01844 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.312e-6■■■□□ 18.5
EWSR1Q01844 USP36-214ENST00000589225 5885 ntTSL 1 (best)12.47□□□□□ -0.412e-6■■■□□ 18.5
EWSR1Q01844 USP36-211ENST00000588130 602 ntTSL 26.41□□□□□ -1.382e-6■■■□□ 18.5
EWSR1Q01844 OAZ1-206ENST00000589739 657 ntTSL 213.53□□□□□ -0.241e-7■■■□□ 18.5
EWSR1Q01844 TCF25-224ENST00000570116 1947 ntTSL 513.92□□□□□ -0.182e-7■■■□□ 18.5
EWSR1Q01844 ADARB1-207ENST00000460734 2523 ntTSL 1 (best)20.8■□□□□ 0.928e-7■■■□□ 18.5
EWSR1Q01844 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.236e-9■■■□□ 18.5
EWSR1Q01844 GRAMD4-204ENST00000431155 311 ntTSL 322.29■■□□□ 1.162e-6■■■□□ 18.4
EWSR1Q01844 GRAMD4-205ENST00000447351 375 ntTSL 39.98□□□□□ -0.812e-6■■■□□ 18.4
EWSR1Q01844 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.93■□□□□ 0.148e-7■■■□□ 18.4
EWSR1Q01844 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.7■□□□□ 0.18e-7■■■□□ 18.4
EWSR1Q01844 MTA1-208ENST00000438610 2144 ntTSL 1 (best)15.08■□□□□ 0.018e-7■■■□□ 18.4
EWSR1Q01844 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.28e-7■■■□□ 18.4
EWSR1Q01844 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.318e-7■■■□□ 18.4
EWSR1Q01844 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.195e-6■■■□□ 18.4
EWSR1Q01844 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)16.08■□□□□ 0.165e-6■■■□□ 18.4
EWSR1Q01844 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.055e-6■■■□□ 18.4
EWSR1Q01844 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.075e-6■■■□□ 18.4
EWSR1Q01844 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.12□□□□□ -0.315e-6■■■□□ 18.4
EWSR1Q01844 IL4I1-206ENST00000596022 747 ntTSL 212.71□□□□□ -0.375e-6■■■□□ 18.4
EWSR1Q01844 NUP62-206ENST00000595463 563 ntTSL 412.18□□□□□ -0.465e-6■■■□□ 18.4
EWSR1Q01844 NUP62-204ENST00000594673 564 ntTSL 511.87□□□□□ -0.515e-6■■■□□ 18.4
EWSR1Q01844 NUP62-219ENST00000599830 588 ntTSL 410.97□□□□□ -0.655e-6■■■□□ 18.4
EWSR1Q01844 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.665e-6■■■□□ 18.4
EWSR1Q01844 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.75e-6■■■□□ 18.4
EWSR1Q01844 NUP62-215ENST00000599186 466 ntTSL 510.18□□□□□ -0.785e-6■■■□□ 18.4
EWSR1Q01844 NUP62-214ENST00000598301 565 ntTSL 410.18□□□□□ -0.785e-6■■■□□ 18.4
EWSR1Q01844 IL4I1-205ENST00000596011 714 ntTSL 29.96□□□□□ -0.825e-6■■■□□ 18.4
EWSR1Q01844 IL4I1-207ENST00000597295 651 ntTSL 39.42□□□□□ -0.95e-6■■■□□ 18.4
EWSR1Q01844 NUP62-216ENST00000599560 562 ntTSL 29.27□□□□□ -0.935e-6■■■□□ 18.4
EWSR1Q01844 NUP62-220ENST00000600583 782 ntTSL 49.24□□□□□ -0.935e-6■■■□□ 18.4
EWSR1Q01844 NUP62-223ENST00000601665 531 ntTSL 59.22□□□□□ -0.935e-6■■■□□ 18.4
EWSR1Q01844 NUP62-209ENST00000596437 894 ntTSL 48.9□□□□□ -0.985e-6■■■□□ 18.4
EWSR1Q01844 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.015e-6■■■□□ 18.4
EWSR1Q01844 NUP62-222ENST00000600935 587 ntTSL 48.37□□□□□ -1.075e-6■■■□□ 18.4
EWSR1Q01844 NUP62-203ENST00000593652 905 ntTSL 27.86□□□□□ -1.155e-6■■■□□ 18.4
EWSR1Q01844 NUP62-218ENST00000599788 564 ntTSL 47.81□□□□□ -1.165e-6■■■□□ 18.4
EWSR1Q01844 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.215e-6■■■□□ 18.4
EWSR1Q01844 NUP62-217ENST00000599567 579 ntTSL 47.02□□□□□ -1.295e-6■■■□□ 18.4
EWSR1Q01844 NUP62-213ENST00000597814 510 ntTSL 46.01□□□□□ -1.455e-6■■■□□ 18.4
EWSR1Q01844 NUP62-210ENST00000596680 473 ntTSL 25□□□□□ -1.615e-6■■■□□ 18.4
EWSR1Q01844 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.92■□□□□ 0.142e-6■■■□□ 18.4
EWSR1Q01844 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC7.81□□□□□ -1.162e-6■■■□□ 18.4
EWSR1Q01844 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.95□□□□□ -0.182e-7■■■□□ 18.4
EWSR1Q01844 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.252e-7■■■□□ 18.4
EWSR1Q01844 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.332e-7■■■□□ 18.4
EWSR1Q01844 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.582e-7■■■□□ 18.4
EWSR1Q01844 THUMPD3-AS1-220ENST00000524210 2591 ntTSL 514.08□□□□□ -0.162e-8■■■□□ 18.4
EWSR1Q01844 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.47□□□□□ -0.412e-8■■■□□ 18.4
EWSR1Q01844 THUMPD3-AS1-208ENST00000498199 511 ntTSL 211.98□□□□□ -0.492e-8■■■□□ 18.4
EWSR1Q01844 THUMPD3-AS1-206ENST00000489616 583 ntTSL 211.89□□□□□ -0.512e-8■■■□□ 18.4
EWSR1Q01844 THUMPD3-AS1-213ENST00000520629 415 ntTSL 311.85□□□□□ -0.512e-8■■■□□ 18.4
EWSR1Q01844 THUMPD3-AS1-214ENST00000521267 851 ntTSL 33.99□□□□□ -1.772e-8■■■□□ 18.4
EWSR1Q01844 THUMPD3-AS1-211ENST00000520396 550 ntTSL 33.22□□□□□ -1.892e-8■■■□□ 18.4
EWSR1Q01844 MVD-213ENST00000566636 863 ntTSL 314.47□□□□□ -0.095e-8■■■□□ 18.4
EWSR1Q01844 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.88■□□□□ 0.293e-7■■■□□ 18.4
EWSR1Q01844 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.133e-7■■■□□ 18.4
EWSR1Q01844 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)12.2□□□□□ -0.463e-7■■■□□ 18.4
EWSR1Q01844 MTA1-210ENST00000481012 987 ntTSL 512.47□□□□□ -0.419e-7■■■□□ 18.4
EWSR1Q01844 MTA1-204ENST00000424723 904 ntTSL 1 (best)11.36□□□□□ -0.599e-7■■■□□ 18.4
EWSR1Q01844 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.232e-6■■■□□ 18.4
EWSR1Q01844 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.312e-6■■■□□ 18.4
EWSR1Q01844 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.42e-6■■■□□ 18.4
EWSR1Q01844 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.341e-6■■■□□ 18.4
EWSR1Q01844 GATAD2A-207ENST00000432704 570 ntTSL 413.63□□□□□ -0.234e-6■■■□□ 18.3
EWSR1Q01844 GATAD2A-208ENST00000444839 565 ntTSL 513.05□□□□□ -0.324e-6■■■□□ 18.3
EWSR1Q01844 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.554e-6■■■□□ 18.3
EWSR1Q01844 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.634e-6■■■□□ 18.3
EWSR1Q01844 GATAD2A-205ENST00000418032 3480 ntTSL 29.7□□□□□ -0.864e-6■■■□□ 18.3
EWSR1Q01844 GATAD2A-206ENST00000429242 504 ntTSL 38.21□□□□□ -1.14e-6■■■□□ 18.3
EWSR1Q01844 GATAD2A-211ENST00000473184 430 ntTSL 33.82□□□□□ -1.84e-6■■■□□ 18.3
EWSR1Q01844 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.24■□□□□ 0.198e-7■■■□□ 18.3
EWSR1Q01844 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.77□□□□□ -0.378e-7■■■□□ 18.3
EWSR1Q01844 ANP32A-201ENST00000267918 1084 ntTSL 310.96□□□□□ -0.651e-6■■■□□ 18.3
EWSR1Q01844 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.91□□□□□ -0.181e-8■■■□□ 18.3
EWSR1Q01844 SUZ12P1-204ENST00000579526 563 ntTSL 215.84■□□□□ 0.131e-6■■■□□ 18.3
EWSR1Q01844 SLC6A8-207ENST00000466243 544 ntTSL 210□□□□□ -0.812e-12■■■□□ 18.3
EWSR1Q01844 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC10.3□□□□□ -0.763e-6■■■□□ 18.3
EWSR1Q01844 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.338e-8■■■□□ 18.2
EWSR1Q01844 BRD9-212ENST00000495265 2843 ntTSL 215.45■□□□□ 0.068e-8■■■□□ 18.2
EWSR1Q01844 BRD9-208ENST00000489816 3170 ntTSL 1 (best)13.42□□□□□ -0.268e-8■■■□□ 18.2
EWSR1Q01844 BRD9-213ENST00000495794 4865 ntTSL 212.14□□□□□ -0.478e-8■■■□□ 18.2
EWSR1Q01844 BRD9-201ENST00000466684 1417 ntTSL 212.09□□□□□ -0.478e-8■■■□□ 18.2
EWSR1Q01844 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC10.34□□□□□ -0.758e-8■■■□□ 18.2
EWSR1Q01844 BRD9-209ENST00000490814 3477 ntTSL 1 (best)8.77□□□□□ -1.018e-8■■■□□ 18.2
EWSR1Q01844 BRD9-211ENST00000494422 449 ntTSL 34.89□□□□□ -1.638e-8■■■□□ 18.2
EWSR1Q01844 RPL22-203ENST00000465335 806 ntTSL 312.3□□□□□ -0.442e-6■■■□□ 18.2
EWSR1Q01844 RPL22-205ENST00000471204 524 ntTSL 23.83□□□□□ -1.82e-6■■■□□ 18.2
Retrieved 100 of 7,101 protein–RNA pairs in 41.7 ms