Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 IRF3-219ENST00000597636 2874 ntTSL 517.6■□□□□ 0.412e-7■■■■□ 26.2
AARSP49588 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.42e-7■■■■□ 26.2
AARSP49588 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.29■□□□□ 0.362e-7■■■■□ 26.2
AARSP49588 IRF3-226ENST00000600453 700 ntTSL 316.96■□□□□ 0.312e-7■■■■□ 26.2
AARSP49588 C2orf48-202ENST00000619640 480 ntTSL 1 (best)16.57■□□□□ 0.242e-7■■■■□ 26.2
AARSP49588 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.99■□□□□ 0.152e-7■■■■□ 26.2
AARSP49588 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.132e-7■■■■□ 26.2
AARSP49588 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.77■□□□□ 0.122e-7■■■■□ 26.2
AARSP49588 WDR34-206ENST00000483181 801 ntTSL 215.75■□□□□ 0.112e-7■■■■□ 26.2
AARSP49588 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.072e-7■■■■□ 26.2
AARSP49588 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.5■□□□□ 0.072e-7■■■■□ 26.2
AARSP49588 PKD1-202ENST00000415938 3386 ntTSL 515.01□□□□□ -0.012e-7■■■■□ 26.2
AARSP49588 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.84□□□□□ -0.032e-7■■■■□ 26.2
AARSP49588 IRF3-212ENST00000596756 931 ntTSL 514.8□□□□□ -0.042e-7■■■■□ 26.2
AARSP49588 IRF3-229ENST00000601373 680 ntTSL 214.52□□□□□ -0.092e-7■■■■□ 26.2
AARSP49588 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.22□□□□□ -0.132e-7■■■■□ 26.2
AARSP49588 PKD1-216ENST00000483731 4193 ntTSL 513.43□□□□□ -0.262e-7■■■■□ 26.2
AARSP49588 IRF3-206ENST00000593818 924 ntTSL 213.26□□□□□ -0.292e-7■■■■□ 26.2
AARSP49588 PPWD1-206ENST00000508982 838 ntTSL 213□□□□□ -0.332e-7■■■■□ 26.2
AARSP49588 COX7A2-208ENST00000509698 480 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.552e-7■■■■□ 26.2
AARSP49588 PPWD1-207ENST00000510930 2019 ntTSL 211.16□□□□□ -0.622e-7■■■■□ 26.2
AARSP49588 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.662e-7■■■■□ 26.2
AARSP49588 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.672e-7■■■■□ 26.2
AARSP49588 PPWD1-213ENST00000515447 580 ntTSL 410.3□□□□□ -0.762e-7■■■■□ 26.2
AARSP49588 SH2B1-210ENST00000566176 546 ntTSL 410□□□□□ -0.812e-7■■■■□ 26.2
AARSP49588 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.812e-7■■■■□ 26.2
AARSP49588 PPWD1-203ENST00000503435 592 ntTSL 49.88□□□□□ -0.832e-7■■■■□ 26.2
AARSP49588 PPWD1-209ENST00000511908 1981 ntTSL 29.87□□□□□ -0.832e-7■■■■□ 26.2
AARSP49588 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.842e-7■■■■□ 26.2
AARSP49588 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC9.29□□□□□ -0.922e-7■■■■□ 26.2
AARSP49588 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC9.29□□□□□ -0.922e-7■■■■□ 26.2
AARSP49588 PHF2P2-202ENST00000444553 2865 ntBASIC9.11□□□□□ -0.952e-7■■■■□ 26.2
AARSP49588 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.062e-7■■■■□ 26.2
AARSP49588 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.46□□□□□ -1.062e-7■■■■□ 26.2
AARSP49588 SPEN-204ENST00000471538 1404 ntTSL 26.96□□□□□ -1.32e-9■■■■□ 26.2
AARSP49588 SPEN-202ENST00000438066 1733 ntTSL 36.82□□□□□ -1.322e-9■■■■□ 26.2
AARSP49588 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.482e-7■■■■□ 26.2
AARSP49588 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.622e-7■■■■□ 26.2
AARSP49588 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.64□□□□□ -1.672e-7■■■■□ 26.2
AARSP49588 COX7A2-204ENST00000459637 501 ntTSL 24.61□□□□□ -1.672e-7■■■■□ 26.2
AARSP49588 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.692e-7■■■■□ 26.2
AARSP49588 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.852e-7■■■■□ 26.2
AARSP49588 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.49□□□□□ -2.332e-7■■■■□ 26.2
AARSP49588 PDXK-206ENST00000398085 796 ntTSL 323.65■■□□□ 1.382e-6■■■■□ 26.2
AARSP49588 PDXK-218ENST00000498040 888 ntTSL 519.66■□□□□ 0.742e-6■■■■□ 26.2
AARSP49588 PDXK-204ENST00000398078 1069 ntTSL 218.12■□□□□ 0.492e-6■■■■□ 26.2
AARSP49588 PDXK-211ENST00000468392 1094 ntTSL 216.79■□□□□ 0.282e-6■■■■□ 26.2
AARSP49588 PDXK-217ENST00000490666 577 ntTSL 515.88■□□□□ 0.132e-6■■■■□ 26.2
AARSP49588 PDXK-203ENST00000343528 1101 ntTSL 1 (best)15.37■□□□□ 0.052e-6■■■■□ 26.2
AARSP49588 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.59□□□□□ -0.072e-6■■■■□ 26.2
AARSP49588 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.332e-6■■■■□ 26.2
AARSP49588 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC11.78□□□□□ -0.522e-6■■■■□ 26.2
AARSP49588 PDXK-216ENST00000481512 583 ntTSL 510.54□□□□□ -0.722e-6■■■■□ 26.2
AARSP49588 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.52□□□□□ -0.094e-6■■■■□ 26.2
AARSP49588 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.91□□□□□ -0.184e-6■■■■□ 26.2
AARSP49588 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.66■■□□□ 1.222e-6■■■■□ 26.1
AARSP49588 UNKL-206ENST00000402641 669 ntTSL 320.17■□□□□ 0.822e-6■■■■□ 26.1
AARSP49588 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.322e-6■■■■□ 26.1
AARSP49588 YWHAZ-213ENST00000492736 681 ntTSL 323.43■■□□□ 1.347e-7■■■■□ 26
AARSP49588 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.13■□□□□ 0.334e-6■■■■□ 26
AARSP49588 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.254e-6■■■■□ 26
AARSP49588 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.24■□□□□ 0.194e-6■■■■□ 26
AARSP49588 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.12■□□□□ 0.174e-6■■■■□ 26
AARSP49588 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.03■□□□□ 0.164e-6■■■■□ 26
AARSP49588 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.03■□□□□ 0.164e-6■■■■□ 26
AARSP49588 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.034e-6■■■■□ 26
AARSP49588 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)14.85□□□□□ -0.034e-6■■■■□ 26
AARSP49588 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.67□□□□□ -0.224e-6■■■■□ 26
AARSP49588 AC092384.3-202ENST00000564646 2873 ntBASIC18.03■□□□□ 0.483e-6■■■■□ 25.9
AARSP49588 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.96■□□□□ 0.472e-8■■■■□ 25.8
AARSP49588 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.432e-6■■■■□ 25.8
AARSP49588 ZFP62-203ENST00000506377 725 ntTSL 1 (best)17.06■□□□□ 0.322e-8■■■■□ 25.8
AARSP49588 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.072e-8■■■■□ 25.8
AARSP49588 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -02e-8■■■■□ 25.8
AARSP49588 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -02e-6■■■■□ 25.8
AARSP49588 LINC00963-210ENST00000608272 612 ntTSL 514.14□□□□□ -0.152e-8■■■■□ 25.8
AARSP49588 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.182e-8■■■■□ 25.8
AARSP49588 LINC00963-213ENST00000622120 355 ntTSL 513.51□□□□□ -0.252e-8■■■■□ 25.8
AARSP49588 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.42e-6■■■■□ 25.8
AARSP49588 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.412e-6■■■■□ 25.8
AARSP49588 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC12.11□□□□□ -0.472e-8■■■■□ 25.8
AARSP49588 LINC00963-214ENST00000622680 781 ntTSL 1 (best)11.91□□□□□ -0.52e-8■■■■□ 25.8
AARSP49588 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC11.55□□□□□ -0.562e-8■■■■□ 25.8
AARSP49588 LINC00963-207ENST00000454635 910 ntTSL 5 BASIC11.47□□□□□ -0.572e-8■■■■□ 25.8
AARSP49588 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.752e-8■■■■□ 25.8
AARSP49588 LINC00963-206ENST00000453213 469 ntTSL 39.22□□□□□ -0.932e-8■■■■□ 25.8
AARSP49588 LINC00963-209ENST00000607931 473 ntTSL 59.03□□□□□ -0.962e-8■■■■□ 25.8
AARSP49588 ZFP62-205ENST00000507843 518 ntTSL 38.31□□□□□ -1.082e-8■■■■□ 25.8
AARSP49588 LINC00963-218ENST00000624138 261 ntTSL 57.9□□□□□ -1.142e-8■■■■□ 25.8
AARSP49588 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.73□□□□□ -1.172e-8■■■■□ 25.8
AARSP49588 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.262e-8■■■■□ 25.8
AARSP49588 PSMD5-204ENST00000373920 569 ntTSL 56.01□□□□□ -1.452e-8■■■■□ 25.8
AARSP49588 BLVRB-203ENST00000597870 1392 ntTSL 520.05■□□□□ 0.82e-6■■■■□ 25.7
AARSP49588 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.222e-6■■■■□ 25.7
AARSP49588 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC14.36□□□□□ -0.112e-6■■■■□ 25.7
AARSP49588 AL669831.3-209ENST00000440200 413 ntTSL 55.47□□□□□ -1.537e-10■■■■□ 25.6
AARSP49588 AL669831.3-203ENST00000419394 491 ntTSL 54.36□□□□□ -1.717e-10■■■■□ 25.6
AARSP49588 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.642e-6■■■■□ 25.5
AARSP49588 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.98■□□□□ 0.152e-6■■■■□ 25.5
AARSP49588 UNKL-207ENST00000403703 4281 ntTSL 1 (best)14.55□□□□□ -0.082e-6■■■■□ 25.5
Retrieved 100 of 8,200 protein–RNA pairs in 75.9 ms