Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.492e-6■■■□□ 18
CSTF2P33240 ZSWIM5-202ENST00000464588 390 ntTSL 315.2■□□□□ 0.022e-6■■■□□ 18
CSTF2P33240 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC11.7□□□□□ -0.541e-11■■■□□ 18
CSTF2P33240 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.751e-11■■■□□ 18
CSTF2P33240 RPL17-C18orf32-202ENST00000577910 1012 ntTSL 56.86□□□□□ -1.311e-11■■■□□ 18
CSTF2P33240 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.351e-11■■■□□ 18
CSTF2P33240 PAPOLA-213ENST00000555224 534 ntTSL 53.58□□□□□ -1.842e-17■■■□□ 18
CSTF2P33240 PPP2R2D-205ENST00000490777 1462 ntTSL 1 (best)16.49■□□□□ 0.239e-7■■■□□ 17.9
CSTF2P33240 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.322e-6■■■□□ 17.9
CSTF2P33240 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.342e-6■■■□□ 17.9
CSTF2P33240 NF1-219ENST00000579081 8788 ntTSL 1 (best)5.15□□□□□ -1.582e-6■■■□□ 17.9
CSTF2P33240 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.036e-12■■■□□ 17.9
CSTF2P33240 SEC13-215ENST00000477547 1313 ntTSL 214.71□□□□□ -0.056e-12■■■□□ 17.9
CSTF2P33240 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.28□□□□□ -0.126e-12■■■□□ 17.9
CSTF2P33240 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.256e-12■■■□□ 17.9
CSTF2P33240 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.54□□□□□ -0.46e-12■■■□□ 17.9
CSTF2P33240 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.53□□□□□ -0.46e-12■■■□□ 17.9
CSTF2P33240 SEC13-216ENST00000479868 2374 ntTSL 1 (best)12.12□□□□□ -0.476e-12■■■□□ 17.9
CSTF2P33240 SEC13-214ENST00000476597 614 ntTSL 210.65□□□□□ -0.76e-12■■■□□ 17.9
CSTF2P33240 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.424e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.44□□□□□ -0.424e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.28□□□□□ -0.444e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC11.61□□□□□ -0.554e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-215ENST00000611738 4817 ntTSL 4 BASIC11.19□□□□□ -0.624e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-213ENST00000538149 4797 ntTSL 2 BASIC11.1□□□□□ -0.634e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-201ENST00000317582 2992 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.714e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-216ENST00000616863 4761 ntTSL 4 BASIC10.35□□□□□ -0.754e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-211ENST00000493680 2112 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.84e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC9.86□□□□□ -0.834e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-204ENST00000399777 2677 ntTSL 1 (best)9.71□□□□□ -0.854e-6■■■□□ 17.9
CSTF2P33240 BCL2L13-212ENST00000498133 2662 ntTSL 29.37□□□□□ -0.914e-6■■■□□ 17.9
CSTF2P33240 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.299e-7■■■□□ 17.9
CSTF2P33240 AF241726.2-201ENST00000465127 954 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.847e-9■■■□□ 17.8
CSTF2P33240 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.74■□□□□ 0.915e-6■■■□□ 17.8
CSTF2P33240 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.85■□□□□ 0.135e-6■■■□□ 17.8
CSTF2P33240 WWOX-209ENST00000563358 724 ntTSL 314.46□□□□□ -0.095e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.215e-6■■■□□ 17.8
CSTF2P33240 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.245e-6■■■□□ 17.8
CSTF2P33240 WWOX-206ENST00000561846 769 ntTSL 313.16□□□□□ -0.35e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.355e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.425e-6■■■□□ 17.8
CSTF2P33240 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.445e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.925e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.955e-6■■■□□ 17.8
CSTF2P33240 WWOX-211ENST00000565791 1210 ntTSL 37.76□□□□□ -1.175e-6■■■□□ 17.8
CSTF2P33240 RBM6-207ENST00000434592 2342 ntTSL 26.3□□□□□ -1.45e-6■■■□□ 17.8
CSTF2P33240 PMS2P3-207ENST00000529061 717 ntBASIC5.31□□□□□ -1.565e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-205ENST00000463890 575 ntTSL 54.34□□□□□ -1.715e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-214ENST00000480832 574 ntTSL 33.9□□□□□ -1.795e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-213ENST00000479879 565 ntTSL 53.82□□□□□ -1.85e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.875e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-220ENST00000492665 475 ntTSL 33.3□□□□□ -1.885e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-219ENST00000491500 559 ntTSL 42.76□□□□□ -1.975e-6■■■□□ 17.8
CSTF2P33240 ZBTB20-210ENST00000470556 427 ntTSL 22.16□□□□□ -2.065e-6■■■□□ 17.8
CSTF2P33240 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.99■□□□□ 0.471e-9■■■□□ 17.8
CSTF2P33240 DNAJB6-212ENST00000465908 694 ntTSL 315.79■□□□□ 0.121e-9■■■□□ 17.8
CSTF2P33240 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.39■□□□□ 0.051e-9■■■□□ 17.8
CSTF2P33240 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.251e-9■■■□□ 17.8
CSTF2P33240 DNAJB6-211ENST00000459889 7992 ntTSL 1 (best)13.46□□□□□ -0.261e-9■■■□□ 17.8
CSTF2P33240 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.311e-9■■■□□ 17.8
CSTF2P33240 DNAJB6-216ENST00000487480 5173 ntTSL 1 (best)9.71□□□□□ -0.851e-9■■■□□ 17.8
CSTF2P33240 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.515e-6■■■□□ 17.8
CSTF2P33240 SFXN5-210ENST00000472259 1690 ntTSL 323.07■■□□□ 1.283e-6■■■□□ 17.8
CSTF2P33240 SFXN5-213ENST00000479293 1808 ntTSL 222.98■■□□□ 1.273e-6■■■□□ 17.8
CSTF2P33240 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.6■□□□□ 0.893e-6■■■□□ 17.8
CSTF2P33240 MAGI1-209ENST00000476403 622 ntTSL 220.5■□□□□ 0.873e-6■■■□□ 17.8
CSTF2P33240 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.723e-6■■■□□ 17.8
CSTF2P33240 TRIO-223ENST00000515710 1913 ntTSL 318.68■□□□□ 0.583e-6■■■□□ 17.8
CSTF2P33240 CCDC68-203ENST00000587148 1081 ntTSL 218.23■□□□□ 0.513e-6■■■□□ 17.8
CSTF2P33240 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.073e-6■■■□□ 17.8
CSTF2P33240 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.65□□□□□ -0.233e-6■■■□□ 17.8
CSTF2P33240 APC-206ENST00000507379 3602 ntTSL 213.33□□□□□ -0.273e-6■■■□□ 17.8
CSTF2P33240 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.33e-6■■■□□ 17.8
CSTF2P33240 MAGI1-203ENST00000460329 3694 ntTSL 513.01□□□□□ -0.333e-6■■■□□ 17.8
CSTF2P33240 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.69□□□□□ -0.383e-6■■■□□ 17.8
CSTF2P33240 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.61□□□□□ -0.395e-6■■■□□ 17.8
CSTF2P33240 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.6□□□□□ -0.395e-6■■■□□ 17.8
CSTF2P33240 MAGI1-204ENST00000463103 4193 ntTSL 512.46□□□□□ -0.413e-6■■■□□ 17.8
CSTF2P33240 SFXN5-212ENST00000475630 422 ntTSL 312.42□□□□□ -0.423e-6■■■□□ 17.8
CSTF2P33240 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.533e-6■■■□□ 17.8
CSTF2P33240 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC10.08□□□□□ -0.85e-6■■■□□ 17.8
CSTF2P33240 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC9.94□□□□□ -0.825e-6■■■□□ 17.8
CSTF2P33240 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.93e-6■■■□□ 17.8
CSTF2P33240 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.933e-6■■■□□ 17.8
CSTF2P33240 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC8.96□□□□□ -0.983e-6■■■□□ 17.8
CSTF2P33240 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC8.94□□□□□ -0.983e-6■■■□□ 17.8
CSTF2P33240 RHBDD1-214ENST00000493526 1003 ntTSL 38.36□□□□□ -1.073e-6■■■□□ 17.8
CSTF2P33240 CHPT1-208ENST00000552215 4342 ntTSL 1 (best)7.86□□□□□ -1.153e-6■■■□□ 17.8
CSTF2P33240 RHBDD1-213ENST00000491490 801 ntTSL 1 (best)7.37□□□□□ -1.233e-6■■■□□ 17.8
CSTF2P33240 SFXN5-217ENST00000485057 447 ntTSL 56.83□□□□□ -1.323e-6■■■□□ 17.8
CSTF2P33240 DNAJC13-205ENST00000486798 2306 ntTSL 1 (best)6.3□□□□□ -1.43e-6■■■□□ 17.8
CSTF2P33240 APC-208ENST00000508624 7406 ntTSL 1 (best)5.13□□□□□ -1.593e-6■■■□□ 17.8
CSTF2P33240 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.693e-6■■■□□ 17.8
CSTF2P33240 APC-210ENST00000512211 4061 ntTSL 24.35□□□□□ -1.713e-6■■■□□ 17.8
CSTF2P33240 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.28□□□□□ -1.723e-6■■■□□ 17.8
CSTF2P33240 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.813e-6■■■□□ 17.8
CSTF2P33240 SFXN5-216ENST00000484123 351 ntTSL 23.16□□□□□ -1.93e-6■■■□□ 17.8
CSTF2P33240 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.973e-6■■■□□ 17.8
CSTF2P33240 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.24□□□□□ -1.251e-6■■■□□ 17.8
CSTF2P33240 TBC1D5-227ENST00000485432 566 ntTSL 420.26■□□□□ 0.835e-6■■■□□ 17.8
Retrieved 100 of 6,735 protein–RNA pairs in 41.5 ms