RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 MYT1Q01538 1121 aa8.8□□□□□ -1
NF1-219ENST00000579081 DCAF8L2P0C7V8 631 aa8.61□□□□□ -1.03
NF1-219ENST00000579081 PELP1Q8IZL8 1130 aaKnown RBP8.48□□□□□ -1.05
NF1-219ENST00000579081 TTBK1Q5TCY1 1321 aaPredicted RBP8.33□□□□□ -1.08
NF1-219ENST00000579081 SUPT5HO00267 1087 aaKnown RBP8.02□□□□□ -1.12
NF1-219ENST00000579081 ERICH6Q7L0X2 663 aa8□□□□□ -1.13
NF1-219ENST00000579081 FAM9AQ8IZU1 332 aaPredicted RBP7.99□□□□□ -1.13
NF1-219ENST00000579081 EHMT2Q96KQ7 1210 aa7.99□□□□□ -1.13
NF1-219ENST00000579081 APLP2Q06481 763 aa7.99□□□□□ -1.13
NF1-219ENST00000579081 CCER1Q8TC90 406 aaPredicted RBP7.93□□□□□ -1.14
NF1-219ENST00000579081 YTHDC1Q96MU7 727 aaKnown RBP7.93□□□□□ -1.14
NF1-219ENST00000579081 ZEB1P37275 1124 aaPredicted RBP7.83□□□□□ -1.16
NF1-219ENST00000579081 CENPBP07199 599 aaPredicted RBP7.73□□□□□ -1.17
NF1-219ENST00000579081 CLSPNQ9HAW4 1339 aa7.71□□□□□ -1.17
NF1-219ENST00000579081 SHROOM4Q9ULL8 1493 aa7.7□□□□□ -1.18
NF1-219ENST00000579081 NEFLP07196 543 aa7.69□□□□□ -1.18
NF1-219ENST00000579081 ATP1B4Q9UN42 357 aaPredicted RBP7.68□□□□□ -1.18
NF1-219ENST00000579081 NISCHQ9Y2I1 1504 aa7.66□□□□□ -1.18
NF1-219ENST00000579081 PCGF6Q9BYE7 350 aa7.65□□□□□ -1.18
NF1-219ENST00000579081 RANGAP1P46060 587 aaPredicted RBP7.65□□□□□ -1.19
NF1-219ENST00000579081 MYT1LQ9UL68 1186 aa7.64□□□□□ -1.19
NF1-219ENST00000579081 DAXXQ9UER7 740 aaPredicted RBP7.62□□□□□ -1.19
NF1-219ENST00000579081 POLR3GLQ9BT43 218 aa7.47□□□□□ -1.21
NF1-219ENST00000579081 UBTFP17480 764 aaKnown RBP7.45□□□□□ -1.22
NF1-219ENST00000579081 TRIM41Q8WV44 630 aa7.41□□□□□ -1.22
NF1-219ENST00000579081 SLC4A1APQ9BWU0 796 aaKnown RBP7.4□□□□□ -1.22
NF1-219ENST00000579081 ZNF316A6NFI3 1004 aaPredicted RBP7.39□□□□□ -1.23
NF1-219ENST00000579081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.39□□□□□ -1.23
NF1-219ENST00000579081 HNRNPUL2Q1KMD3 747 aaKnown RBP7.39□□□□□ -1.23
NF1-219ENST00000579081 CHIC1Q5VXU3 224 aa7.38□□□□□ -1.23
NF1-219ENST00000579081 ACIN1Q9UKV3 1341 aaKnown RBP7.36□□□□□ -1.23
NF1-219ENST00000579081 CNGB1Q14028 1251 aaPredicted RBP7.36□□□□□ -1.23
NF1-219ENST00000579081 RTL5Q5HYW3 569 aaPredicted RBP7.36□□□□□ -1.23
NF1-219ENST00000579081 ARID4BQ4LE39 1312 aaPredicted RBP7.34□□□□□ -1.23
NF1-219ENST00000579081 ITGAEP38570 1179 aa7.3□□□□□ -1.24
NF1-219ENST00000579081 ZBTB47Q9UFB7 747 aaPredicted RBP7.28□□□□□ -1.24
NF1-219ENST00000579081 PPARGC1BQ86YN6 1023 aaKnown RBP7.25□□□□□ -1.25
NF1-219ENST00000579081 GLIPR1L2Q4G1C9 344 aa7.24□□□□□ -1.25
NF1-219ENST00000579081 SLC24A1O60721 1099 aa7.21□□□□□ -1.26
NF1-219ENST00000579081 BCL11AQ9H165 835 aa7.16□□□□□ -1.26
NF1-219ENST00000579081 NEFMP07197 916 aa7.13□□□□□ -1.27
NF1-219ENST00000579081 CANXP27824 592 aaKnown RBP7.13□□□□□ -1.27
NF1-219ENST00000579081 TRIM26Q12899 539 aaPredicted RBP7.13□□□□□ -1.27
NF1-219ENST00000579081 TRIM52Q96A61 297 aa7.12□□□□□ -1.27
NF1-219ENST00000579081 EIF5BO60841 1220 aaKnown RBP7.12□□□□□ -1.27
NF1-219ENST00000579081 BCANQ96GW7 911 aa7.11□□□□□ -1.27
NF1-219ENST00000579081 HRCP23327 699 aa7.1□□□□□ -1.27
NF1-219ENST00000579081 CDK11AQ9UQ88 783 aaPredicted RBP7.07□□□□□ -1.28
NF1-219ENST00000579081 FAM50AQ14320 339 aaKnown RBP7.06□□□□□ -1.28
NF1-219ENST00000579081 ANP32EQ9BTT0 268 aa7.06□□□□□ -1.28
NF1-219ENST00000579081 NCLP19338 710 aaKnown RBP7.06□□□□□ -1.28
NF1-219ENST00000579081 ZNF326Q5BKZ1 582 aaKnown RBP7.06□□□□□ -1.28
NF1-219ENST00000579081 ANP32BQ92688 251 aaKnown RBP7.06□□□□□ -1.28
NF1-219ENST00000579081 CDK11BP21127 795 aaKnown RBP7.02□□□□□ -1.29
NF1-219ENST00000579081 NEUROD1Q13562 356 aa7.02□□□□□ -1.29
NF1-219ENST00000579081 ANP32CO43423 234 aa7.02□□□□□ -1.29
NF1-219ENST00000579081 DIEXFQ68CQ4 756 aaKnown RBP6.99□□□□□ -1.29
NF1-219ENST00000579081 HSP90AA1P07900 732 aaKnown RBP6.99□□□□□ -1.29
NF1-219ENST00000579081 ANP32AP39687 249 aaKnown RBP6.98□□□□□ -1.29
NF1-219ENST00000579081 CCDC180Q9P1Z9 1646 aa6.98□□□□□ -1.29
NF1-219ENST00000579081 ESF1Q9H501 851 aaKnown RBP6.97□□□□□ -1.29
NF1-219ENST00000579081 DCAF1Q9Y4B6 1507 aa6.97□□□□□ -1.29
NF1-219ENST00000579081 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
NF1-219ENST00000579081 FBLN2P98095 1184 aa6.93□□□□□ -1.3
NF1-219ENST00000579081 UPF2Q9HAU5 1272 aaKnown RBP6.93□□□□□ -1.3
NF1-219ENST00000579081 STAG3Q9UJ98 1225 aa6.92□□□□□ -1.3
NF1-219ENST00000579081 PLPPR3Q6T4P5 718 aa6.91□□□□□ -1.3
NF1-219ENST00000579081 LOC105371045A0A1W2PR82 267 aa6.89□□□□□ -1.31
NF1-219ENST00000579081 A0A0G2JS52 829 aa6.89□□□□□ -1.31
NF1-219ENST00000579081 CHGAP10645 457 aaKnown RBP6.89□□□□□ -1.31
NF1-219ENST00000579081 SCAF1Q9H7N4 1312 aaKnown RBP6.89□□□□□ -1.31
NF1-219ENST00000579081 TRIM44Q96DX7 344 aaPredicted RBP6.88□□□□□ -1.31
NF1-219ENST00000579081 ERICH6BQ5W0A0 696 aa6.87□□□□□ -1.31
NF1-219ENST00000579081 GTF3C3Q9Y5Q9 886 aa6.87□□□□□ -1.31
NF1-219ENST00000579081 EEA1Q15075 1411 aa6.85□□□□□ -1.31
NF1-219ENST00000579081 ZNF777Q9ULD5 760 aaPredicted RBP6.85□□□□□ -1.31
NF1-219ENST00000579081 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.83□□□□□ -1.32
NF1-219ENST00000579081 ARXQ96QS3 562 aa6.82□□□□□ -1.32
NF1-219ENST00000579081 ARID3CA6NKF2 412 aa6.82□□□□□ -1.32
NF1-219ENST00000579081 TULP1O00294 542 aaPredicted RBP6.82□□□□□ -1.32
NF1-219ENST00000579081 LAS1LQ9Y4W2 734 aaKnown RBP6.81□□□□□ -1.32
NF1-219ENST00000579081 MYH16Q9H6N6 1097 aa6.8□□□□□ -1.32
NF1-219ENST00000579081 NPM1P06748 294 aaKnown RBP eCLIP6.8□□□□□ -1.32
NF1-219ENST00000579081 TNNT2P45379 298 aaPredicted RBP6.8□□□□□ -1.32
NF1-219ENST00000579081 ZBTB7CA1YPR0 619 aa6.8□□□□□ -1.32
NF1-219ENST00000579081 HMGB1P09429 215 aaKnown RBP6.79□□□□□ -1.32
NF1-219ENST00000579081 ZRSR1Q15695 479 aaKnown RBP6.78□□□□□ -1.32
NF1-219ENST00000579081 PKNOX2Q96KN3 472 aa6.78□□□□□ -1.32
NF1-219ENST00000579081 SALL2Q9Y467 1007 aaPredicted RBP6.78□□□□□ -1.32
NF1-219ENST00000579081 PTMSP20962 102 aa6.77□□□□□ -1.33
NF1-219ENST00000579081 WDR43Q15061 677 aaKnown RBP eCLIP6.77□□□□□ -1.33
NF1-219ENST00000579081 USP35Q9P2H5 1018 aa6.76□□□□□ -1.33
NF1-219ENST00000579081 CFAP44Q96MT7 982 aa6.76□□□□□ -1.33
NF1-219ENST00000579081 P3H3Q8IVL6 736 aa6.76□□□□□ -1.33
NF1-219ENST00000579081 FKBP8Q14318 412 aa6.76□□□□□ -1.33
NF1-219ENST00000579081 PLEKHG5O94827 1062 aa6.75□□□□□ -1.33
NF1-219ENST00000579081 C14orf37Q86TY3 774 aa6.75□□□□□ -1.33
NF1-219ENST00000579081 FAM9BQ8IZU0 186 aa6.75□□□□□ -1.33
NF1-219ENST00000579081 HAP1P54257 671 aaPredicted RBP6.75□□□□□ -1.33
NF1-219ENST00000579081 CCDC136Q96JN2 1154 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms