RNA–Protein interactions for RNA: ENST00000491490.5

RHBDD1-213, Transcript of rhomboid domain containing 1, humanhuman

TSL 1 (best)

Gene RHBDD1, Length 801 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-213ENST00000491490 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
RHBDD1-213ENST00000491490 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
RHBDD1-213ENST00000491490 NISCHQ9Y2I1 1504 aa18.02■□□□□ 0.47
RHBDD1-213ENST00000491490 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
RHBDD1-213ENST00000491490 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
RHBDD1-213ENST00000491490 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
RHBDD1-213ENST00000491490 ABCC9O60706 1549 aa15.3■□□□□ 0.04
RHBDD1-213ENST00000491490 FOXD1Q16676 465 aa15.2■□□□□ 0.02
RHBDD1-213ENST00000491490 ZCCHC6Q5VYS8 1495 aaKnown RBP15.1■□□□□ 0.01
RHBDD1-213ENST00000491490 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
RHBDD1-213ENST00000491490 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
RHBDD1-213ENST00000491490 NACADO15069 1562 aa14.79□□□□□ -0.04
RHBDD1-213ENST00000491490 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
RHBDD1-213ENST00000491490 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.04
RHBDD1-213ENST00000491490 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
RHBDD1-213ENST00000491490 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
RHBDD1-213ENST00000491490 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
RHBDD1-213ENST00000491490 UNC13AQ9UPW8 1703 aa14.51□□□□□ -0.09
RHBDD1-213ENST00000491490 ADRA2BP18089 450 aa14.39□□□□□ -0.11
RHBDD1-213ENST00000491490 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
RHBDD1-213ENST00000491490 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
RHBDD1-213ENST00000491490 BICRAQ9NZM4 1560 aa14.32□□□□□ -0.12
RHBDD1-213ENST00000491490 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
RHBDD1-213ENST00000491490 MSH5O43196 834 aa14.1□□□□□ -0.15
RHBDD1-213ENST00000491490 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
RHBDD1-213ENST00000491490 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
RHBDD1-213ENST00000491490 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.18
RHBDD1-213ENST00000491490 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
RHBDD1-213ENST00000491490 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
RHBDD1-213ENST00000491490 EIF4G1Q04637 1599 aaKnown RBP13.94□□□□□ -0.18
RHBDD1-213ENST00000491490 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
RHBDD1-213ENST00000491490 WIZO95785 1651 aa13.86□□□□□ -0.19
RHBDD1-213ENST00000491490 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
RHBDD1-213ENST00000491490 ATAD2BQ9ULI0 1458 aa13.74□□□□□ -0.21
RHBDD1-213ENST00000491490 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
RHBDD1-213ENST00000491490 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.21
RHBDD1-213ENST00000491490 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
RHBDD1-213ENST00000491490 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
RHBDD1-213ENST00000491490 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
RHBDD1-213ENST00000491490 HMGXB3Q12766 1538 aa13.63□□□□□ -0.23
RHBDD1-213ENST00000491490 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
RHBDD1-213ENST00000491490 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
RHBDD1-213ENST00000491490 POTEDQ86YR6 584 aa13.47□□□□□ -0.25
RHBDD1-213ENST00000491490 NESP48681 1621 aa13.34□□□□□ -0.27
RHBDD1-213ENST00000491490 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
RHBDD1-213ENST00000491490 CFTRP13569 1480 aa13.27□□□□□ -0.29
RHBDD1-213ENST00000491490 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
RHBDD1-213ENST00000491490 LAMC3Q9Y6N6 1575 aa13.26□□□□□ -0.29
RHBDD1-213ENST00000491490 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
RHBDD1-213ENST00000491490 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
RHBDD1-213ENST00000491490 FANCD2Q9BXW9 1451 aa13.19□□□□□ -0.3
RHBDD1-213ENST00000491490 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
RHBDD1-213ENST00000491490 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
RHBDD1-213ENST00000491490 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
RHBDD1-213ENST00000491490 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
RHBDD1-213ENST00000491490 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
RHBDD1-213ENST00000491490 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
RHBDD1-213ENST00000491490 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
RHBDD1-213ENST00000491490 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
RHBDD1-213ENST00000491490 CUX1P39880 1505 aa13.07□□□□□ -0.32
RHBDD1-213ENST00000491490 URB2Q14146 1524 aaKnown RBP13.04□□□□□ -0.32
RHBDD1-213ENST00000491490 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
RHBDD1-213ENST00000491490 DNMBPQ6XZF7 1577 aa13.03□□□□□ -0.32
RHBDD1-213ENST00000491490 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
RHBDD1-213ENST00000491490 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
RHBDD1-213ENST00000491490 BIVM-ERCC5R4GMW8 1640 aa13.02□□□□□ -0.32
RHBDD1-213ENST00000491490 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
RHBDD1-213ENST00000491490 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
RHBDD1-213ENST00000491490 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
RHBDD1-213ENST00000491490 WDR62O43379 1518 aa12.97□□□□□ -0.33
RHBDD1-213ENST00000491490 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
RHBDD1-213ENST00000491490 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
RHBDD1-213ENST00000491490 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
RHBDD1-213ENST00000491490 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
RHBDD1-213ENST00000491490 SOGA1O94964 1423 aa12.88□□□□□ -0.35
RHBDD1-213ENST00000491490 CUX2O14529 1486 aa12.85□□□□□ -0.35
RHBDD1-213ENST00000491490 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
RHBDD1-213ENST00000491490 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
RHBDD1-213ENST00000491490 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
RHBDD1-213ENST00000491490 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
RHBDD1-213ENST00000491490 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
RHBDD1-213ENST00000491490 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
RHBDD1-213ENST00000491490 ABCA10Q8WWZ4 1543 aa12.79□□□□□ -0.36
RHBDD1-213ENST00000491490 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
RHBDD1-213ENST00000491490 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
RHBDD1-213ENST00000491490 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
RHBDD1-213ENST00000491490 ABCA5Q8WWZ7 1642 aa12.77□□□□□ -0.37
RHBDD1-213ENST00000491490 PBRM1Q86U86 1689 aa12.76□□□□□ -0.37
RHBDD1-213ENST00000491490 AQRO60306 1485 aaKnown RBP eCLIP12.75□□□□□ -0.37
RHBDD1-213ENST00000491490 GAPVD1Q14C86 1478 aa12.74□□□□□ -0.37
RHBDD1-213ENST00000491490 EEA1Q15075 1411 aa12.72□□□□□ -0.37
RHBDD1-213ENST00000491490 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
RHBDD1-213ENST00000491490 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
RHBDD1-213ENST00000491490 SNAPC4Q5SXM2 1469 aa12.67□□□□□ -0.38
RHBDD1-213ENST00000491490 GRIN2BQ13224 1484 aa12.66□□□□□ -0.38
RHBDD1-213ENST00000491490 CUL7Q14999 1698 aa12.65□□□□□ -0.38
RHBDD1-213ENST00000491490 LOC105371045A0A1W2PR82 267 aa12.65□□□□□ -0.38
RHBDD1-213ENST00000491490 ERICH3Q5RHP9 1530 aa12.65□□□□□ -0.38
RHBDD1-213ENST00000491490 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
RHBDD1-213ENST00000491490 KIF21BO75037 1637 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms