RNA–Protein interactions for RNA: ENST00000507379.5

APC-206, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 2

Gene APC, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-206ENST00000507379 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
APC-206ENST00000507379 SHROOM4Q9ULL8 1493 aa23.98■■□□□ 1.43
APC-206ENST00000507379 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
APC-206ENST00000507379 HRCP23327 699 aa23.29■■□□□ 1.32
APC-206ENST00000507379 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
APC-206ENST00000507379 PPARGC1BQ86YN6 1023 aaKnown RBP23.13■■□□□ 1.29
APC-206ENST00000507379 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
APC-206ENST00000507379 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
APC-206ENST00000507379 MYO15BQ96JP2 1530 aa22.95■■□□□ 1.27
APC-206ENST00000507379 LOC105371045A0A1W2PR82 267 aa22.69■■□□□ 1.22
APC-206ENST00000507379 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
APC-206ENST00000507379 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
APC-206ENST00000507379 EHMT2Q96KQ7 1210 aa22.31■■□□□ 1.16
APC-206ENST00000507379 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
APC-206ENST00000507379 DCAF1Q9Y4B6 1507 aa22.19■■□□□ 1.14
APC-206ENST00000507379 FAM9AQ8IZU1 332 aaPredicted RBP22.17■■□□□ 1.14
APC-206ENST00000507379 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
APC-206ENST00000507379 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
APC-206ENST00000507379 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
APC-206ENST00000507379 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
APC-206ENST00000507379 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
APC-206ENST00000507379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.66■■□□□ 1.06
APC-206ENST00000507379 CCER1Q8TC90 406 aaPredicted RBP21.62■■□□□ 1.05
APC-206ENST00000507379 NEUROD1Q13562 356 aa21.56■■□□□ 1.04
APC-206ENST00000507379 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.04
APC-206ENST00000507379 GTF3C3Q9Y5Q9 886 aa21.52■■□□□ 1.04
APC-206ENST00000507379 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.02
APC-206ENST00000507379 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.01
APC-206ENST00000507379 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
APC-206ENST00000507379 YTHDC1Q96MU7 727 aaKnown RBP21.34■■□□□ 1.01
APC-206ENST00000507379 MYT1Q01538 1121 aa21.26■□□□□ 0.99
APC-206ENST00000507379 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
APC-206ENST00000507379 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
APC-206ENST00000507379 ABCC9O60706 1549 aa21.23■□□□□ 0.99
APC-206ENST00000507379 UBTFP17480 764 aaKnown RBP20.94■□□□□ 0.94
APC-206ENST00000507379 ZNF316A6NFI3 1004 aaPredicted RBP20.94■□□□□ 0.94
APC-206ENST00000507379 CECR2Q9BXF3 1484 aa20.93■□□□□ 0.94
APC-206ENST00000507379 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
APC-206ENST00000507379 MIER1Q8N108 512 aa20.86■□□□□ 0.93
APC-206ENST00000507379 RANGAP1P46060 587 aaPredicted RBP20.82■□□□□ 0.92
APC-206ENST00000507379 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
APC-206ENST00000507379 CEP162Q5TB80 1403 aa20.73■□□□□ 0.91
APC-206ENST00000507379 WIZO95785 1651 aa20.7■□□□□ 0.9
APC-206ENST00000507379 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
APC-206ENST00000507379 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
APC-206ENST00000507379 SOGA1O94964 1423 aa20.62■□□□□ 0.89
APC-206ENST00000507379 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
APC-206ENST00000507379 APLP2Q06481 763 aa20.58■□□□□ 0.88
APC-206ENST00000507379 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
APC-206ENST00000507379 TNIKQ9UKE5 1360 aa20.49■□□□□ 0.87
APC-206ENST00000507379 RUSC2Q8N2Y8 1516 aa20.48■□□□□ 0.87
APC-206ENST00000507379 BCANQ96GW7 911 aa20.36■□□□□ 0.85
APC-206ENST00000507379 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
APC-206ENST00000507379 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
APC-206ENST00000507379 ITGAEP38570 1179 aa20.3■□□□□ 0.84
APC-206ENST00000507379 GOLGA3Q08378 1498 aa20.29■□□□□ 0.84
APC-206ENST00000507379 CLIP1P30622 1438 aa20.26■□□□□ 0.83
APC-206ENST00000507379 NACADO15069 1562 aa20.26■□□□□ 0.83
APC-206ENST00000507379 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
APC-206ENST00000507379 TSHZ2Q9NRE2 1034 aa20.23■□□□□ 0.83
APC-206ENST00000507379 ANP32EQ9BTT0 268 aa20.22■□□□□ 0.83
APC-206ENST00000507379 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
APC-206ENST00000507379 EEA1Q15075 1411 aa20.19■□□□□ 0.82
APC-206ENST00000507379 PABPN1Q86U42 306 aaKnown RBP eCLIP20.19■□□□□ 0.82
APC-206ENST00000507379 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
APC-206ENST00000507379 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
APC-206ENST00000507379 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
APC-206ENST00000507379 VPS8Q8N3P4 1428 aa20.08■□□□□ 0.81
APC-206ENST00000507379 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.8
APC-206ENST00000507379 FKBP8Q14318 412 aa20.07■□□□□ 0.8
APC-206ENST00000507379 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
APC-206ENST00000507379 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
APC-206ENST00000507379 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.8
APC-206ENST00000507379 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
APC-206ENST00000507379 RAPGEF2Q9Y4G8 1499 aa20.01■□□□□ 0.79
APC-206ENST00000507379 DDX10Q13206 875 aaKnown RBP19.99■□□□□ 0.79
APC-206ENST00000507379 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
APC-206ENST00000507379 NEFLP07196 543 aa19.94■□□□□ 0.78
APC-206ENST00000507379 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
APC-206ENST00000507379 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
APC-206ENST00000507379 KIF21BO75037 1637 aa19.86■□□□□ 0.77
APC-206ENST00000507379 ATP1B4Q9UN42 357 aaPredicted RBP19.86■□□□□ 0.77
APC-206ENST00000507379 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.76
APC-206ENST00000507379 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
APC-206ENST00000507379 FAM50AQ14320 339 aaKnown RBP19.8■□□□□ 0.76
APC-206ENST00000507379 ERICH6Q7L0X2 663 aa19.79■□□□□ 0.76
APC-206ENST00000507379 IRX6P78412 446 aaPredicted RBP19.74■□□□□ 0.75
APC-206ENST00000507379 CCNB3Q8WWL7 1395 aa19.73■□□□□ 0.75
APC-206ENST00000507379 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
APC-206ENST00000507379 RAB3GAP2Q9H2M9 1393 aa19.7■□□□□ 0.74
APC-206ENST00000507379 ANP32CO43423 234 aa19.7■□□□□ 0.74
APC-206ENST00000507379 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
APC-206ENST00000507379 ARAP1Q96P48 1450 aa19.65■□□□□ 0.74
APC-206ENST00000507379 RRBP1Q9P2E9 1410 aaKnown RBP19.57■□□□□ 0.72
APC-206ENST00000507379 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
APC-206ENST00000507379 MSH5O43196 834 aa19.56■□□□□ 0.72
APC-206ENST00000507379 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
APC-206ENST00000507379 WDR97A6NE52 1622 aa19.52■□□□□ 0.72
APC-206ENST00000507379 UNC13AQ9UPW8 1703 aa19.52■□□□□ 0.72
APC-206ENST00000507379 CDK11AQ9UQ88 783 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms