RNA–Protein interactions for RNA: ENST00000392062.6

RHBDD1-202, Transcript of rhomboid domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RHBDD1, Length 5,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-202ENST00000392062 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
RHBDD1-202ENST00000392062 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
RHBDD1-202ENST00000392062 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
RHBDD1-202ENST00000392062 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
RHBDD1-202ENST00000392062 ABCC9O60706 1549 aa15.22■□□□□ 0.03
RHBDD1-202ENST00000392062 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
RHBDD1-202ENST00000392062 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
RHBDD1-202ENST00000392062 APLP2Q06481 763 aa15.01□□□□□ -0.01
RHBDD1-202ENST00000392062 TRIM41Q8WV44 630 aa15□□□□□ -0.01
RHBDD1-202ENST00000392062 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
RHBDD1-202ENST00000392062 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
RHBDD1-202ENST00000392062 UBTFP17480 764 aaKnown RBP14.71□□□□□ -0.05
RHBDD1-202ENST00000392062 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
RHBDD1-202ENST00000392062 RANGAP1P46060 587 aaPredicted RBP14.67□□□□□ -0.06
RHBDD1-202ENST00000392062 ATP1B4Q9UN42 357 aaPredicted RBP14.58□□□□□ -0.08
RHBDD1-202ENST00000392062 TTBK1Q5TCY1 1321 aaPredicted RBP14.53□□□□□ -0.08
RHBDD1-202ENST00000392062 SCRIBQ14160 1630 aa14.49□□□□□ -0.09
RHBDD1-202ENST00000392062 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
RHBDD1-202ENST00000392062 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
RHBDD1-202ENST00000392062 PCGF6Q9BYE7 350 aa14.4□□□□□ -0.1
RHBDD1-202ENST00000392062 NACADO15069 1562 aa14.39□□□□□ -0.11
RHBDD1-202ENST00000392062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
RHBDD1-202ENST00000392062 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
RHBDD1-202ENST00000392062 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
RHBDD1-202ENST00000392062 ZEB1P37275 1124 aaPredicted RBP14.22□□□□□ -0.13
RHBDD1-202ENST00000392062 CCER1Q8TC90 406 aaPredicted RBP14.22□□□□□ -0.13
RHBDD1-202ENST00000392062 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.14
RHBDD1-202ENST00000392062 PPARGC1BQ86YN6 1023 aaKnown RBP14.12□□□□□ -0.15
RHBDD1-202ENST00000392062 TRIM26Q12899 539 aaPredicted RBP14.11□□□□□ -0.15
RHBDD1-202ENST00000392062 MYT1LQ9UL68 1186 aa14.06□□□□□ -0.16
RHBDD1-202ENST00000392062 FBLN2P98095 1184 aa14.05□□□□□ -0.16
RHBDD1-202ENST00000392062 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.16
RHBDD1-202ENST00000392062 ITGAEP38570 1179 aa14□□□□□ -0.17
RHBDD1-202ENST00000392062 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
RHBDD1-202ENST00000392062 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
RHBDD1-202ENST00000392062 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
RHBDD1-202ENST00000392062 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
RHBDD1-202ENST00000392062 PELP1Q8IZL8 1130 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-202ENST00000392062 FAM50AQ14320 339 aaKnown RBP13.83□□□□□ -0.19
RHBDD1-202ENST00000392062 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
RHBDD1-202ENST00000392062 P3H3Q8IVL6 736 aa13.78□□□□□ -0.2
RHBDD1-202ENST00000392062 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.2
RHBDD1-202ENST00000392062 CENPBP07199 599 aaPredicted RBP13.72□□□□□ -0.21
RHBDD1-202ENST00000392062 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.21
RHBDD1-202ENST00000392062 EEA1Q15075 1411 aa13.7□□□□□ -0.22
RHBDD1-202ENST00000392062 CHMP7Q8WUX9 453 aaPredicted RBP13.7□□□□□ -0.22
RHBDD1-202ENST00000392062 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
RHBDD1-202ENST00000392062 TRIM52Q96A61 297 aa13.68□□□□□ -0.22
RHBDD1-202ENST00000392062 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
RHBDD1-202ENST00000392062 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
RHBDD1-202ENST00000392062 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
RHBDD1-202ENST00000392062 ARID3CA6NKF2 412 aa13.65□□□□□ -0.22
RHBDD1-202ENST00000392062 HRCP23327 699 aa13.62□□□□□ -0.23
RHBDD1-202ENST00000392062 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
RHBDD1-202ENST00000392062 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
RHBDD1-202ENST00000392062 ZNF777Q9ULD5 760 aaPredicted RBP13.56□□□□□ -0.24
RHBDD1-202ENST00000392062 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
RHBDD1-202ENST00000392062 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
RHBDD1-202ENST00000392062 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
RHBDD1-202ENST00000392062 CLIP1P30622 1438 aa13.52□□□□□ -0.24
RHBDD1-202ENST00000392062 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
RHBDD1-202ENST00000392062 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
RHBDD1-202ENST00000392062 NEUROD1Q13562 356 aa13.48□□□□□ -0.25
RHBDD1-202ENST00000392062 NEFLP07196 543 aa13.48□□□□□ -0.25
RHBDD1-202ENST00000392062 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
RHBDD1-202ENST00000392062 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
RHBDD1-202ENST00000392062 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
RHBDD1-202ENST00000392062 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
RHBDD1-202ENST00000392062 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
RHBDD1-202ENST00000392062 WIZO95785 1651 aa13.42□□□□□ -0.26
RHBDD1-202ENST00000392062 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
RHBDD1-202ENST00000392062 CUX2O14529 1486 aa13.42□□□□□ -0.26
RHBDD1-202ENST00000392062 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
RHBDD1-202ENST00000392062 TNIKQ9UKE5 1360 aa13.41□□□□□ -0.26
RHBDD1-202ENST00000392062 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
RHBDD1-202ENST00000392062 PLEKHD1A6NEE1 506 aa13.39□□□□□ -0.27
RHBDD1-202ENST00000392062 TSPY4P0CV99 314 aa13.39□□□□□ -0.27
RHBDD1-202ENST00000392062 TSPY10P0CW01 314 aa13.39□□□□□ -0.27
RHBDD1-202ENST00000392062 ZNF326Q5BKZ1 582 aaKnown RBP13.38□□□□□ -0.27
RHBDD1-202ENST00000392062 CARMIL1Q5VZK9 1371 aa13.38□□□□□ -0.27
RHBDD1-202ENST00000392062 SOGA1O94964 1423 aa13.34□□□□□ -0.27
RHBDD1-202ENST00000392062 CNGB1Q14028 1251 aaPredicted RBP13.33□□□□□ -0.28
RHBDD1-202ENST00000392062 BCANQ96GW7 911 aa13.29□□□□□ -0.28
RHBDD1-202ENST00000392062 KCNH8Q96L42 1107 aa13.29□□□□□ -0.28
RHBDD1-202ENST00000392062 CHIC2Q9UKJ5 165 aa13.28□□□□□ -0.28
RHBDD1-202ENST00000392062 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
RHBDD1-202ENST00000392062 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
RHBDD1-202ENST00000392062 DIEXFQ68CQ4 756 aaKnown RBP13.28□□□□□ -0.28
RHBDD1-202ENST00000392062 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.28
RHBDD1-202ENST00000392062 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.29
RHBDD1-202ENST00000392062 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
RHBDD1-202ENST00000392062 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
RHBDD1-202ENST00000392062 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
RHBDD1-202ENST00000392062 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
RHBDD1-202ENST00000392062 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
RHBDD1-202ENST00000392062 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
RHBDD1-202ENST00000392062 CHGAP10645 457 aaKnown RBP13.22□□□□□ -0.29
RHBDD1-202ENST00000392062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
RHBDD1-202ENST00000392062 CARMIL2Q6F5E8 1435 aa13.21□□□□□ -0.29
RHBDD1-202ENST00000392062 ANP32CO43423 234 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms