RNA–Protein interactions for RNA: ENST00000341329.7

RHBDD1-201, Transcript of rhomboid domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD1, Length 4,883 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-201ENST00000341329 NISCHQ9Y2I1 1504 aa21.15■□□□□ 0.98
RHBDD1-201ENST00000341329 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
RHBDD1-201ENST00000341329 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
RHBDD1-201ENST00000341329 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
RHBDD1-201ENST00000341329 ZEB1P37275 1124 aaPredicted RBP18.82■□□□□ 0.6
RHBDD1-201ENST00000341329 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
RHBDD1-201ENST00000341329 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
RHBDD1-201ENST00000341329 APLP2Q06481 763 aa18.68■□□□□ 0.58
RHBDD1-201ENST00000341329 EHMT2Q96KQ7 1210 aa18.58■□□□□ 0.57
RHBDD1-201ENST00000341329 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
RHBDD1-201ENST00000341329 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
RHBDD1-201ENST00000341329 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
RHBDD1-201ENST00000341329 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
RHBDD1-201ENST00000341329 HRCP23327 699 aa18.32■□□□□ 0.52
RHBDD1-201ENST00000341329 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
RHBDD1-201ENST00000341329 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
RHBDD1-201ENST00000341329 MYT1Q01538 1121 aa18.12■□□□□ 0.49
RHBDD1-201ENST00000341329 UBTFP17480 764 aaKnown RBP18.1■□□□□ 0.49
RHBDD1-201ENST00000341329 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
RHBDD1-201ENST00000341329 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
RHBDD1-201ENST00000341329 RANGAP1P46060 587 aaPredicted RBP17.81■□□□□ 0.44
RHBDD1-201ENST00000341329 NEFLP07196 543 aa17.77■□□□□ 0.44
RHBDD1-201ENST00000341329 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
RHBDD1-201ENST00000341329 PPARGC1BQ86YN6 1023 aaKnown RBP17.68■□□□□ 0.42
RHBDD1-201ENST00000341329 ZCCHC6Q5VYS8 1495 aaKnown RBP17.67■□□□□ 0.42
RHBDD1-201ENST00000341329 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
RHBDD1-201ENST00000341329 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
RHBDD1-201ENST00000341329 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
RHBDD1-201ENST00000341329 DCAF1Q9Y4B6 1507 aa17.51■□□□□ 0.39
RHBDD1-201ENST00000341329 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
RHBDD1-201ENST00000341329 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
RHBDD1-201ENST00000341329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
RHBDD1-201ENST00000341329 ABCC9O60706 1549 aa17.34■□□□□ 0.37
RHBDD1-201ENST00000341329 ITGAEP38570 1179 aa17.3■□□□□ 0.36
RHBDD1-201ENST00000341329 ZNF316A6NFI3 1004 aaPredicted RBP17.23■□□□□ 0.35
RHBDD1-201ENST00000341329 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
RHBDD1-201ENST00000341329 ACIN1Q9UKV3 1341 aaKnown RBP17.12■□□□□ 0.33
RHBDD1-201ENST00000341329 GTF3C3Q9Y5Q9 886 aa17.12■□□□□ 0.33
RHBDD1-201ENST00000341329 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
RHBDD1-201ENST00000341329 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
RHBDD1-201ENST00000341329 FAM50AQ14320 339 aaKnown RBP17.06■□□□□ 0.32
RHBDD1-201ENST00000341329 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
RHBDD1-201ENST00000341329 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.31
RHBDD1-201ENST00000341329 ANP32CO43423 234 aa16.99■□□□□ 0.31
RHBDD1-201ENST00000341329 EEA1Q15075 1411 aa16.95■□□□□ 0.3
RHBDD1-201ENST00000341329 POLR3GLQ9BT43 218 aa16.93■□□□□ 0.3
RHBDD1-201ENST00000341329 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
RHBDD1-201ENST00000341329 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
RHBDD1-201ENST00000341329 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
RHBDD1-201ENST00000341329 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
RHBDD1-201ENST00000341329 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
RHBDD1-201ENST00000341329 NACADO15069 1562 aa16.83■□□□□ 0.28
RHBDD1-201ENST00000341329 CDK11AQ9UQ88 783 aaPredicted RBP16.81■□□□□ 0.28
RHBDD1-201ENST00000341329 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
RHBDD1-201ENST00000341329 GOLGA3Q08378 1498 aa16.74■□□□□ 0.27
RHBDD1-201ENST00000341329 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
RHBDD1-201ENST00000341329 CLIP1P30622 1438 aa16.71■□□□□ 0.27
RHBDD1-201ENST00000341329 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
RHBDD1-201ENST00000341329 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
RHBDD1-201ENST00000341329 BCANQ96GW7 911 aa16.67■□□□□ 0.26
RHBDD1-201ENST00000341329 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
RHBDD1-201ENST00000341329 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
RHBDD1-201ENST00000341329 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
RHBDD1-201ENST00000341329 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
RHBDD1-201ENST00000341329 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
RHBDD1-201ENST00000341329 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
RHBDD1-201ENST00000341329 P3H3Q8IVL6 736 aa16.57■□□□□ 0.24
RHBDD1-201ENST00000341329 ZNF326Q5BKZ1 582 aaKnown RBP16.52■□□□□ 0.24
RHBDD1-201ENST00000341329 FKBP8Q14318 412 aa16.5■□□□□ 0.23
RHBDD1-201ENST00000341329 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
RHBDD1-201ENST00000341329 MIER1Q8N108 512 aa16.49■□□□□ 0.23
RHBDD1-201ENST00000341329 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
RHBDD1-201ENST00000341329 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
RHBDD1-201ENST00000341329 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
RHBDD1-201ENST00000341329 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
RHBDD1-201ENST00000341329 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
RHBDD1-201ENST00000341329 MTUS2Q5JR59 1369 aa16.42■□□□□ 0.22
RHBDD1-201ENST00000341329 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
RHBDD1-201ENST00000341329 FBLN2P98095 1184 aa16.35■□□□□ 0.21
RHBDD1-201ENST00000341329 TIMELESSQ9UNS1 1208 aa16.33■□□□□ 0.21
RHBDD1-201ENST00000341329 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
RHBDD1-201ENST00000341329 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
RHBDD1-201ENST00000341329 EIF4G2P78344 907 aaKnown RBP eCLIP16.31■□□□□ 0.2
RHBDD1-201ENST00000341329 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
RHBDD1-201ENST00000341329 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
RHBDD1-201ENST00000341329 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
RHBDD1-201ENST00000341329 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
RHBDD1-201ENST00000341329 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.19
RHBDD1-201ENST00000341329 NEFMP07197 916 aa16.26■□□□□ 0.19
RHBDD1-201ENST00000341329 MRS2Q9HD23 443 aa16.25■□□□□ 0.19
RHBDD1-201ENST00000341329 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
RHBDD1-201ENST00000341329 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
RHBDD1-201ENST00000341329 CCNB3Q8WWL7 1395 aa16.24■□□□□ 0.19
RHBDD1-201ENST00000341329 SOGA1O94964 1423 aa16.23■□□□□ 0.19
RHBDD1-201ENST00000341329 CCDC136Q96JN2 1154 aa16.22■□□□□ 0.19
RHBDD1-201ENST00000341329 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
RHBDD1-201ENST00000341329 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.22■□□□□ 0.19
RHBDD1-201ENST00000341329 TSPY4P0CV99 314 aa16.21■□□□□ 0.19
RHBDD1-201ENST00000341329 TSPY10P0CW01 314 aa16.21■□□□□ 0.19
RHBDD1-201ENST00000341329 CHIC2Q9UKJ5 165 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms