Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COPEO14579 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.5■■□□□ 1.03
COPEO14579 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
COPEO14579 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COPEO14579 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.5■■□□□ 1.03
COPEO14579 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
COPEO14579 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.5■■□□□ 1.03
COPEO14579 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPEO14579 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
COPEO14579 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPEO14579 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPEO14579 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPEO14579 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COPEO14579 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPEO14579 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.49■■□□□ 1.03
COPEO14579 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.49■■□□□ 1.03
COPEO14579 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPEO14579 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
COPEO14579 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.49■■□□□ 1.03
COPEO14579 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPEO14579 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPEO14579 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
COPEO14579 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
COPEO14579 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPEO14579 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPEO14579 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COPEO14579 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.48■■□□□ 1.03
COPEO14579 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.48■■□□□ 1.03
COPEO14579 MTDHP2-201ENST00000601468 714 ntBASIC21.48■■□□□ 1.03
COPEO14579 AL499627.2-201ENST00000606283 725 ntBASIC21.48■■□□□ 1.03
COPEO14579 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPEO14579 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COPEO14579 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPEO14579 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
COPEO14579 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.47■■□□□ 1.03
COPEO14579 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPEO14579 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPEO14579 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COPEO14579 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COPEO14579 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COPEO14579 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COPEO14579 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
COPEO14579 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COPEO14579 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.47■■□□□ 1.03
COPEO14579 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.46■■□□□ 1.03
COPEO14579 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
COPEO14579 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
COPEO14579 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.46■■□□□ 1.03
COPEO14579 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.46■■□□□ 1.03
COPEO14579 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPEO14579 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
COPEO14579 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
COPEO14579 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.03
COPEO14579 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
COPEO14579 AC073130.3-201ENST00000624389 2278 ntBASIC21.45■■□□□ 1.02
COPEO14579 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
COPEO14579 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.45■■□□□ 1.02
COPEO14579 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.45■■□□□ 1.02
COPEO14579 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.45■■□□□ 1.02
COPEO14579 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COPEO14579 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPEO14579 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.45■■□□□ 1.02
COPEO14579 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.44■■□□□ 1.02
COPEO14579 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms