Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM1O00151 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM1O00151 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM1O00151 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM1O00151 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM1O00151 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM1O00151 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM1O00151 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM1O00151 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM1O00151 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PDLIM1O00151 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.4■□□□□ 0.86
PDLIM1O00151 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM1O00151 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM1O00151 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDLIM1O00151 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.39■□□□□ 0.86
PDLIM1O00151 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM1O00151 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDLIM1O00151 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PDLIM1O00151 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.39■□□□□ 0.85
PDLIM1O00151 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM1O00151 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM1O00151 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM1O00151 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.39■□□□□ 0.85
PDLIM1O00151 AC092028.1-203ENST00000608262 953 ntBASIC20.39■□□□□ 0.85
PDLIM1O00151 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDLIM1O00151 AC244015.2-201ENST00000616358 1861 ntBASIC20.39■□□□□ 0.85
PDLIM1O00151 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.39■□□□□ 0.85
PDLIM1O00151 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
PDLIM1O00151 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM1O00151 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM1O00151 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.38■□□□□ 0.85
PDLIM1O00151 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDLIM1O00151 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM1O00151 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM1O00151 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
PDLIM1O00151 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.38■□□□□ 0.85
PDLIM1O00151 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM1O00151 AL020996.1-203ENST00000536896 2307 ntBASIC20.38■□□□□ 0.85
PDLIM1O00151 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM1O00151 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM1O00151 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.37■□□□□ 0.85
PDLIM1O00151 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM1O00151 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM1O00151 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
PDLIM1O00151 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM1O00151 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM1O00151 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PDLIM1O00151 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM1O00151 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM1O00151 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM1O00151 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM1O00151 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM1O00151 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM1O00151 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM1O00151 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM1O00151 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
PDLIM1O00151 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM1O00151 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM1O00151 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM1O00151 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.35■□□□□ 0.85
PDLIM1O00151 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM1O00151 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PDLIM1O00151 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM1O00151 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM1O00151 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PDLIM1O00151 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
PDLIM1O00151 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM1O00151 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.35■□□□□ 0.85
PDLIM1O00151 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.35■□□□□ 0.85
PDLIM1O00151 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM1O00151 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM1O00151 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM1O00151 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM1O00151 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM1O00151 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM1O00151 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PDLIM1O00151 AC144652.1-201ENST00000609974 1624 ntBASIC20.35■□□□□ 0.85
PDLIM1O00151 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM1O00151 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM1O00151 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM1O00151 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM1O00151 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM1O00151 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PDLIM1O00151 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms