Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AGPAT4-IT1-201ENST00000624499 1878 ntBASIC12.76□□□□□ -0.37
MTHFRP42898 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 LRRC2-201ENST00000296144 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 SYPL1-201ENST00000011473 2127 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
MTHFRP42898 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 FP885919.1-201ENST00000331259 1038 ntBASIC12.76□□□□□ -0.37
MTHFRP42898 QRFPR-201ENST00000334383 1215 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 IGHV7-81-201ENST00000390639 405 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
MTHFRP42898 AL355994.4-201ENST00000416882 563 ntBASIC12.76□□□□□ -0.37
MTHFRP42898 AC006450.1-201ENST00000421041 460 ntTSL 3 BASIC12.76□□□□□ -0.37
MTHFRP42898 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC12.76□□□□□ -0.37
MTHFRP42898 AL450326.1-201ENST00000442526 760 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 SYNPR-205ENST00000465156 829 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 CAP2-207ENST00000493172 861 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 IGKV2-10-201ENST00000518834 351 ntBASIC12.76□□□□□ -0.37
MTHFRP42898 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 CETN3-204ENST00000522565 867 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC12.76□□□□□ -0.37
MTHFRP42898 AL359220.1-201ENST00000554086 781 ntTSL 3 BASIC12.76□□□□□ -0.37
MTHFRP42898 AC027373.1-201ENST00000564694 1142 ntBASIC12.76□□□□□ -0.37
MTHFRP42898 FGF11-205ENST00000575398 990 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 AL132639.2-201ENST00000605298 1359 ntBASIC12.76□□□□□ -0.37
MTHFRP42898 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 NIFK-AS1-202ENST00000414554 1411 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.76□□□□□ -0.37
MTHFRP42898 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 LDAH-204ENST00000403006 1895 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC12.76□□□□□ -0.37
MTHFRP42898 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MTHFRP42898 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 SOHLH2-201ENST00000317764 1909 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.75□□□□□ -0.37
MTHFRP42898 AC092587.1-201ENST00000410042 669 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 PRAMEF9-201ENST00000415919 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 LINC00539-202ENST00000423575 699 ntTSL 3 BASIC12.75□□□□□ -0.37
MTHFRP42898 AL023754.1-201ENST00000424696 863 ntTSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 PAK3-206ENST00000425146 2477 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 NPAP1P3-201ENST00000432327 1586 ntBASIC12.75□□□□□ -0.37
MTHFRP42898 AC006960.2-201ENST00000435254 531 ntTSL 4 BASIC12.75□□□□□ -0.37
MTHFRP42898 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 AL450998.3-203ENST00000453804 645 ntTSL 3 BASIC12.75□□□□□ -0.37
MTHFRP42898 KRT18P26-201ENST00000454475 1281 ntBASIC12.75□□□□□ -0.37
MTHFRP42898 RN7SL513P-201ENST00000465715 298 ntBASIC12.75□□□□□ -0.37
MTHFRP42898 RN7SL771P-201ENST00000482328 298 ntBASIC12.75□□□□□ -0.37
MTHFRP42898 AC117402.1-201ENST00000485473 856 ntTSL 3 BASIC12.75□□□□□ -0.37
MTHFRP42898 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 AC092819.1-201ENST00000519981 1690 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 RPSAP71-201ENST00000522496 872 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms