RNA–Protein interactions for RNA: ENST00000543067.5

CNKSR2-207, Transcript of connector enhancer of kinase suppressor of Ras 2, humanhuman

TSL 2 BASIC

Gene CNKSR2, Length 4,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR2-207ENST00000543067 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
CNKSR2-207ENST00000543067 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
CNKSR2-207ENST00000543067 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
CNKSR2-207ENST00000543067 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
CNKSR2-207ENST00000543067 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
CNKSR2-207ENST00000543067 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
CNKSR2-207ENST00000543067 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
CNKSR2-207ENST00000543067 FAM9AQ8IZU1 332 aaPredicted RBP19.99■□□□□ 0.79
CNKSR2-207ENST00000543067 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
CNKSR2-207ENST00000543067 PELP1Q8IZL8 1130 aaKnown RBP19.92■□□□□ 0.78
CNKSR2-207ENST00000543067 APLP2Q06481 763 aa19.86■□□□□ 0.77
CNKSR2-207ENST00000543067 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.76
CNKSR2-207ENST00000543067 HRCP23327 699 aa19.81■□□□□ 0.76
CNKSR2-207ENST00000543067 TRIM26Q12899 539 aaPredicted RBP19.68■□□□□ 0.74
CNKSR2-207ENST00000543067 CCER1Q8TC90 406 aaPredicted RBP19.58■□□□□ 0.73
CNKSR2-207ENST00000543067 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
CNKSR2-207ENST00000543067 MYT1Q01538 1121 aa19.5■□□□□ 0.71
CNKSR2-207ENST00000543067 TTBK1Q5TCY1 1321 aaPredicted RBP19.49■□□□□ 0.71
CNKSR2-207ENST00000543067 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
CNKSR2-207ENST00000543067 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
CNKSR2-207ENST00000543067 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
CNKSR2-207ENST00000543067 RANGAP1P46060 587 aaPredicted RBP19.19■□□□□ 0.66
CNKSR2-207ENST00000543067 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
CNKSR2-207ENST00000543067 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
CNKSR2-207ENST00000543067 ABCC9O60706 1549 aa18.93■□□□□ 0.62
CNKSR2-207ENST00000543067 DCAF1Q9Y4B6 1507 aa18.92■□□□□ 0.62
CNKSR2-207ENST00000543067 ATP1B4Q9UN42 357 aaPredicted RBP18.92■□□□□ 0.62
CNKSR2-207ENST00000543067 YTHDC1Q96MU7 727 aaKnown RBP18.9■□□□□ 0.62
CNKSR2-207ENST00000543067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
CNKSR2-207ENST00000543067 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
CNKSR2-207ENST00000543067 NEFLP07196 543 aa18.78■□□□□ 0.6
CNKSR2-207ENST00000543067 DIEXFQ68CQ4 756 aaKnown RBP18.78■□□□□ 0.6
CNKSR2-207ENST00000543067 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
CNKSR2-207ENST00000543067 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
CNKSR2-207ENST00000543067 ITGAEP38570 1179 aa18.62■□□□□ 0.57
CNKSR2-207ENST00000543067 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
CNKSR2-207ENST00000543067 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.57
CNKSR2-207ENST00000543067 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
CNKSR2-207ENST00000543067 GTF3C3Q9Y5Q9 886 aa18.51■□□□□ 0.55
CNKSR2-207ENST00000543067 ACIN1Q9UKV3 1341 aaKnown RBP18.5■□□□□ 0.55
CNKSR2-207ENST00000543067 ZNF316A6NFI3 1004 aaPredicted RBP18.48■□□□□ 0.55
CNKSR2-207ENST00000543067 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
CNKSR2-207ENST00000543067 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
CNKSR2-207ENST00000543067 NACADO15069 1562 aa18.29■□□□□ 0.52
CNKSR2-207ENST00000543067 EEA1Q15075 1411 aa18.26■□□□□ 0.51
CNKSR2-207ENST00000543067 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
CNKSR2-207ENST00000543067 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
CNKSR2-207ENST00000543067 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
CNKSR2-207ENST00000543067 NEUROD1Q13562 356 aa18.15■□□□□ 0.5
CNKSR2-207ENST00000543067 ANP32CO43423 234 aa18.12■□□□□ 0.49
CNKSR2-207ENST00000543067 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
CNKSR2-207ENST00000543067 CEP162Q5TB80 1403 aa18.09■□□□□ 0.49
CNKSR2-207ENST00000543067 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
CNKSR2-207ENST00000543067 CLIP1P30622 1438 aa18.06■□□□□ 0.48
CNKSR2-207ENST00000543067 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
CNKSR2-207ENST00000543067 TRIM52Q96A61 297 aa18.06■□□□□ 0.48
CNKSR2-207ENST00000543067 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
CNKSR2-207ENST00000543067 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
CNKSR2-207ENST00000543067 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
CNKSR2-207ENST00000543067 P3H3Q8IVL6 736 aa17.93■□□□□ 0.46
CNKSR2-207ENST00000543067 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
CNKSR2-207ENST00000543067 DAXXQ9UER7 740 aaPredicted RBP17.89■□□□□ 0.45
CNKSR2-207ENST00000543067 BCANQ96GW7 911 aa17.89■□□□□ 0.45
CNKSR2-207ENST00000543067 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
CNKSR2-207ENST00000543067 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
CNKSR2-207ENST00000543067 TONSLQ96HA7 1378 aa17.85■□□□□ 0.45
CNKSR2-207ENST00000543067 CDK11AQ9UQ88 783 aaPredicted RBP17.84■□□□□ 0.45
CNKSR2-207ENST00000543067 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
CNKSR2-207ENST00000543067 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
CNKSR2-207ENST00000543067 MIER1Q8N108 512 aa17.82■□□□□ 0.44
CNKSR2-207ENST00000543067 RTL5Q5HYW3 569 aaPredicted RBP17.79■□□□□ 0.44
CNKSR2-207ENST00000543067 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
CNKSR2-207ENST00000543067 DDX10Q13206 875 aaKnown RBP17.75■□□□□ 0.43
CNKSR2-207ENST00000543067 SOGA1O94964 1423 aa17.72■□□□□ 0.43
CNKSR2-207ENST00000543067 ZNF326Q5BKZ1 582 aaKnown RBP17.72■□□□□ 0.43
CNKSR2-207ENST00000543067 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
CNKSR2-207ENST00000543067 FKBP8Q14318 412 aa17.68■□□□□ 0.42
CNKSR2-207ENST00000543067 MTUS2Q5JR59 1369 aa17.67■□□□□ 0.42
CNKSR2-207ENST00000543067 VPS8Q8N3P4 1428 aa17.64■□□□□ 0.41
CNKSR2-207ENST00000543067 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
CNKSR2-207ENST00000543067 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
CNKSR2-207ENST00000543067 FBLN2P98095 1184 aa17.61■□□□□ 0.41
CNKSR2-207ENST00000543067 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
CNKSR2-207ENST00000543067 WIZO95785 1651 aa17.61■□□□□ 0.41
CNKSR2-207ENST00000543067 ARID3CA6NKF2 412 aa17.58■□□□□ 0.41
CNKSR2-207ENST00000543067 ZNF777Q9ULD5 760 aaPredicted RBP17.54■□□□□ 0.4
CNKSR2-207ENST00000543067 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
CNKSR2-207ENST00000543067 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
CNKSR2-207ENST00000543067 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
CNKSR2-207ENST00000543067 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
CNKSR2-207ENST00000543067 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
CNKSR2-207ENST00000543067 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
CNKSR2-207ENST00000543067 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
CNKSR2-207ENST00000543067 EIF4G2P78344 907 aaKnown RBP eCLIP17.48■□□□□ 0.39
CNKSR2-207ENST00000543067 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
CNKSR2-207ENST00000543067 ANP32EQ9BTT0 268 aa17.45■□□□□ 0.38
CNKSR2-207ENST00000543067 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
CNKSR2-207ENST00000543067 SMARCA4P51532 1647 aa17.41■□□□□ 0.38
CNKSR2-207ENST00000543067 CARMIL1Q5VZK9 1371 aa17.41■□□□□ 0.38
CNKSR2-207ENST00000543067 HIRIP3Q9BW71 556 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms