Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 ATP2C2-202ENST00000416219 3472 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AC009108.4-201ENST00000623284 2451 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 KCNMB3-203ENST00000392685 1608 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 KCNAB2-204ENST00000378083 4142 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 GSTA2-201ENST00000493422 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ZNF483-203ENST00000358151 2433 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 DLEC1-202ENST00000346219 5490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 IMPDH1P8-201ENST00000413639 1525 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 KIAA1024L-201ENST00000564719 2354 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AF131215.4-201ENST00000526648 1741 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 MED20-204ENST00000409312 932 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ATXN8OS-201ENST00000414504 1148 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AC006022.1-201ENST00000425261 388 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ACTG1P10-201ENST00000428275 1082 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AQP7-207ENST00000447660 998 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AC005011.1-201ENST00000455206 210 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 SCAMP1-AS1-202ENST00000513755 493 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AC023194.3-202ENST00000524253 364 ntTSL 3 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 PMM2-216ENST00000569958 698 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AC068338.3-201ENST00000617892 418 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AC099804.1-201ENST00000623105 714 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 UBR1-212ENST00000627960 189 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AL513478.3-201ENST00000641038 1095 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 PCDHGB8P-202ENST00000507007 2873 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 LINC00923-201ENST00000503768 2036 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AC145098.2-201ENST00000623593 3026 ntBASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 WAC-204ENST00000375646 2176 ntTSL 5 BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NPIPA3F8WFD2 AP002008.2-201ENST00000635926 4870 ntBASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 C2-211ENST00000469372 1906 ntTSL 2 BASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 TUBAL3-202ENST00000479328 1505 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NPIPA3F8WFD2 CTPS2-203ENST00000443824 4319 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms