RNA–Protein interactions for RNA: ENST00000443824.5

CTPS2-203, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS2, Length 4,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-203ENST00000443824 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
CTPS2-203ENST00000443824 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
CTPS2-203ENST00000443824 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
CTPS2-203ENST00000443824 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
CTPS2-203ENST00000443824 ABCC9O60706 1549 aa20.54■□□□□ 0.88
CTPS2-203ENST00000443824 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
CTPS2-203ENST00000443824 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
CTPS2-203ENST00000443824 FAM9AQ8IZU1 332 aaPredicted RBP19.99■□□□□ 0.79
CTPS2-203ENST00000443824 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
CTPS2-203ENST00000443824 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
CTPS2-203ENST00000443824 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
CTPS2-203ENST00000443824 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
CTPS2-203ENST00000443824 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
CTPS2-203ENST00000443824 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
CTPS2-203ENST00000443824 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
CTPS2-203ENST00000443824 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
CTPS2-203ENST00000443824 UBTFP17480 764 aaKnown RBP19.22■□□□□ 0.67
CTPS2-203ENST00000443824 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
CTPS2-203ENST00000443824 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
CTPS2-203ENST00000443824 APLP2Q06481 763 aa19.06■□□□□ 0.64
CTPS2-203ENST00000443824 NACADO15069 1562 aa19.05■□□□□ 0.64
CTPS2-203ENST00000443824 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
CTPS2-203ENST00000443824 ATP1B4Q9UN42 357 aaPredicted RBP19.04■□□□□ 0.64
CTPS2-203ENST00000443824 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
CTPS2-203ENST00000443824 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
CTPS2-203ENST00000443824 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
CTPS2-203ENST00000443824 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
CTPS2-203ENST00000443824 FBLN2P98095 1184 aa18.54■□□□□ 0.56
CTPS2-203ENST00000443824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
CTPS2-203ENST00000443824 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
CTPS2-203ENST00000443824 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
CTPS2-203ENST00000443824 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
CTPS2-203ENST00000443824 ITGAEP38570 1179 aa18.48■□□□□ 0.55
CTPS2-203ENST00000443824 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
CTPS2-203ENST00000443824 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
CTPS2-203ENST00000443824 P3H3Q8IVL6 736 aa18.44■□□□□ 0.54
CTPS2-203ENST00000443824 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
CTPS2-203ENST00000443824 TRIM26Q12899 539 aaPredicted RBP18.37■□□□□ 0.53
CTPS2-203ENST00000443824 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
CTPS2-203ENST00000443824 WIZO95785 1651 aa18.31■□□□□ 0.52
CTPS2-203ENST00000443824 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
CTPS2-203ENST00000443824 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
CTPS2-203ENST00000443824 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
CTPS2-203ENST00000443824 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
CTPS2-203ENST00000443824 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
CTPS2-203ENST00000443824 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
CTPS2-203ENST00000443824 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.48
CTPS2-203ENST00000443824 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
CTPS2-203ENST00000443824 SOGA1O94964 1423 aa18.03■□□□□ 0.48
CTPS2-203ENST00000443824 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
CTPS2-203ENST00000443824 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
CTPS2-203ENST00000443824 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
CTPS2-203ENST00000443824 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
CTPS2-203ENST00000443824 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
CTPS2-203ENST00000443824 HRCP23327 699 aa17.9■□□□□ 0.46
CTPS2-203ENST00000443824 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
CTPS2-203ENST00000443824 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
CTPS2-203ENST00000443824 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
CTPS2-203ENST00000443824 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
CTPS2-203ENST00000443824 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
CTPS2-203ENST00000443824 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
CTPS2-203ENST00000443824 CUX2O14529 1486 aa17.82■□□□□ 0.44
CTPS2-203ENST00000443824 CLIP1P30622 1438 aa17.82■□□□□ 0.44
CTPS2-203ENST00000443824 CEP162Q5TB80 1403 aa17.78■□□□□ 0.44
CTPS2-203ENST00000443824 TRIM52Q96A61 297 aa17.77■□□□□ 0.43
CTPS2-203ENST00000443824 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
CTPS2-203ENST00000443824 RUSC2Q8N2Y8 1516 aa17.76■□□□□ 0.43
CTPS2-203ENST00000443824 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
CTPS2-203ENST00000443824 GOLGA3Q08378 1498 aa17.74■□□□□ 0.43
CTPS2-203ENST00000443824 EEA1Q15075 1411 aa17.74■□□□□ 0.43
CTPS2-203ENST00000443824 NEUROD1Q13562 356 aa17.73■□□□□ 0.43
CTPS2-203ENST00000443824 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
CTPS2-203ENST00000443824 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
CTPS2-203ENST00000443824 NESP48681 1621 aa17.67■□□□□ 0.42
CTPS2-203ENST00000443824 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
CTPS2-203ENST00000443824 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
CTPS2-203ENST00000443824 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
CTPS2-203ENST00000443824 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
CTPS2-203ENST00000443824 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
CTPS2-203ENST00000443824 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
CTPS2-203ENST00000443824 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
CTPS2-203ENST00000443824 CDK11AQ9UQ88 783 aaPredicted RBP17.63■□□□□ 0.41
CTPS2-203ENST00000443824 KCNH8Q96L42 1107 aa17.6■□□□□ 0.41
CTPS2-203ENST00000443824 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.4
CTPS2-203ENST00000443824 MTUS2Q5JR59 1369 aa17.56■□□□□ 0.4
CTPS2-203ENST00000443824 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
CTPS2-203ENST00000443824 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
CTPS2-203ENST00000443824 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
CTPS2-203ENST00000443824 ZNF326Q5BKZ1 582 aaKnown RBP17.5■□□□□ 0.39
CTPS2-203ENST00000443824 KANK4Q5T7N3 995 aaPredicted RBP17.47■□□□□ 0.39
CTPS2-203ENST00000443824 CFTRP13569 1480 aa17.45■□□□□ 0.38
CTPS2-203ENST00000443824 FGD5Q6ZNL6 1462 aa17.45■□□□□ 0.38
CTPS2-203ENST00000443824 RRP7BPQ9NSQ0 103 aa17.43■□□□□ 0.38
CTPS2-203ENST00000443824 PLEKHD1A6NEE1 506 aa17.42■□□□□ 0.38
CTPS2-203ENST00000443824 IGF1RP08069 1367 aa17.4■□□□□ 0.38
CTPS2-203ENST00000443824 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.37
CTPS2-203ENST00000443824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.371e-6■■□□□ 12.6
CTPS2-203ENST00000443824 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
CTPS2-203ENST00000443824 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
CTPS2-203ENST00000443824 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms