RNA–Protein interactions for RNA: ENST00000359120.8

SH3RF2-201, Transcript of SH3 domain containing ring finger 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF2, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2-201ENST00000359120 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
SH3RF2-201ENST00000359120 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
SH3RF2-201ENST00000359120 ZCCHC6Q5VYS8 1495 aaKnown RBP23.9■■□□□ 1.42
SH3RF2-201ENST00000359120 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.36
SH3RF2-201ENST00000359120 MYO15BQ96JP2 1530 aa23.21■■□□□ 1.31
SH3RF2-201ENST00000359120 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
SH3RF2-201ENST00000359120 NACADO15069 1562 aa22.85■■□□□ 1.25
SH3RF2-201ENST00000359120 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
SH3RF2-201ENST00000359120 ABCC9O60706 1549 aa22.73■■□□□ 1.23
SH3RF2-201ENST00000359120 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
SH3RF2-201ENST00000359120 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
SH3RF2-201ENST00000359120 UNC13AQ9UPW8 1703 aa22.21■■□□□ 1.15
SH3RF2-201ENST00000359120 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
SH3RF2-201ENST00000359120 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
SH3RF2-201ENST00000359120 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
SH3RF2-201ENST00000359120 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
SH3RF2-201ENST00000359120 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
SH3RF2-201ENST00000359120 MROH2BQ7Z745 1585 aa21.83■■□□□ 1.09
SH3RF2-201ENST00000359120 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
SH3RF2-201ENST00000359120 WIZO95785 1651 aa21.69■■□□□ 1.06
SH3RF2-201ENST00000359120 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
SH3RF2-201ENST00000359120 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
SH3RF2-201ENST00000359120 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
SH3RF2-201ENST00000359120 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
SH3RF2-201ENST00000359120 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
SH3RF2-201ENST00000359120 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
SH3RF2-201ENST00000359120 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
SH3RF2-201ENST00000359120 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
SH3RF2-201ENST00000359120 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
SH3RF2-201ENST00000359120 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
SH3RF2-201ENST00000359120 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
SH3RF2-201ENST00000359120 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
SH3RF2-201ENST00000359120 ABCC8Q09428 1581 aa20.83■□□□□ 0.93
SH3RF2-201ENST00000359120 PRDM2Q13029 1718 aa20.76■□□□□ 0.91
SH3RF2-201ENST00000359120 CC2D2AQ9P2K1 1620 aa20.74■□□□□ 0.91
SH3RF2-201ENST00000359120 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
SH3RF2-201ENST00000359120 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
SH3RF2-201ENST00000359120 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
SH3RF2-201ENST00000359120 CFTRP13569 1480 aa20.65■□□□□ 0.9
SH3RF2-201ENST00000359120 EEA1Q15075 1411 aa20.64■□□□□ 0.89
SH3RF2-201ENST00000359120 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
SH3RF2-201ENST00000359120 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
SH3RF2-201ENST00000359120 SOGA1O94964 1423 aa20.47■□□□□ 0.87
SH3RF2-201ENST00000359120 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
SH3RF2-201ENST00000359120 CUX1P39880 1505 aa20.42■□□□□ 0.86
SH3RF2-201ENST00000359120 KIF21BO75037 1637 aa20.42■□□□□ 0.86
SH3RF2-201ENST00000359120 FAM9AQ8IZU1 332 aaPredicted RBP20.39■□□□□ 0.85
SH3RF2-201ENST00000359120 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
SH3RF2-201ENST00000359120 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
SH3RF2-201ENST00000359120 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
SH3RF2-201ENST00000359120 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
SH3RF2-201ENST00000359120 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
SH3RF2-201ENST00000359120 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
SH3RF2-201ENST00000359120 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
SH3RF2-201ENST00000359120 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
SH3RF2-201ENST00000359120 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
SH3RF2-201ENST00000359120 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
SH3RF2-201ENST00000359120 PRXQ9BXM0 1461 aa20.16■□□□□ 0.82
SH3RF2-201ENST00000359120 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
SH3RF2-201ENST00000359120 NESP48681 1621 aa20.1■□□□□ 0.81
SH3RF2-201ENST00000359120 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
SH3RF2-201ENST00000359120 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.81
SH3RF2-201ENST00000359120 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
SH3RF2-201ENST00000359120 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
SH3RF2-201ENST00000359120 TRIM26Q12899 539 aaPredicted RBP20.03■□□□□ 0.8
SH3RF2-201ENST00000359120 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.79
SH3RF2-201ENST00000359120 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
SH3RF2-201ENST00000359120 KIF21AQ7Z4S6 1674 aa20.01■□□□□ 0.79
SH3RF2-201ENST00000359120 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
SH3RF2-201ENST00000359120 POLA1P09884 1462 aaPredicted RBP19.98■□□□□ 0.79
SH3RF2-201ENST00000359120 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
SH3RF2-201ENST00000359120 CUX2O14529 1486 aa19.97■□□□□ 0.79
SH3RF2-201ENST00000359120 PCGF6Q9BYE7 350 aa19.96■□□□□ 0.79
SH3RF2-201ENST00000359120 UBTFP17480 764 aaKnown RBP19.92■□□□□ 0.78
SH3RF2-201ENST00000359120 CLIP1P30622 1438 aa19.92■□□□□ 0.78
SH3RF2-201ENST00000359120 IGF1RP08069 1367 aa19.91■□□□□ 0.78
SH3RF2-201ENST00000359120 CUL7Q14999 1698 aa19.9■□□□□ 0.78
SH3RF2-201ENST00000359120 ABCA5Q8WWZ7 1642 aa19.9■□□□□ 0.78
SH3RF2-201ENST00000359120 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
SH3RF2-201ENST00000359120 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
SH3RF2-201ENST00000359120 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
SH3RF2-201ENST00000359120 RAD54L2Q9Y4B4 1467 aa19.83■□□□□ 0.77
SH3RF2-201ENST00000359120 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
SH3RF2-201ENST00000359120 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
SH3RF2-201ENST00000359120 HRCP23327 699 aa19.79■□□□□ 0.76
SH3RF2-201ENST00000359120 CARMIL1Q5VZK9 1371 aa19.78■□□□□ 0.76
SH3RF2-201ENST00000359120 WDR62O43379 1518 aa19.77■□□□□ 0.76
SH3RF2-201ENST00000359120 CTTNBP2Q8WZ74 1663 aa19.73■□□□□ 0.75
SH3RF2-201ENST00000359120 ARHGAP35Q9NRY4 1499 aa19.7■□□□□ 0.74
SH3RF2-201ENST00000359120 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
SH3RF2-201ENST00000359120 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
SH3RF2-201ENST00000359120 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
SH3RF2-201ENST00000359120 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
SH3RF2-201ENST00000359120 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
SH3RF2-201ENST00000359120 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
SH3RF2-201ENST00000359120 ADAMTS12P58397 1594 aa19.58■□□□□ 0.72
SH3RF2-201ENST00000359120 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
SH3RF2-201ENST00000359120 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
SH3RF2-201ENST00000359120 CFAP43Q8NDM7 1665 aa19.51■□□□□ 0.71
SH3RF2-201ENST00000359120 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms