RNA–Protein interactions for RNA: ENST00000618828.1

COL5A2-203, Transcript of collagen type V alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL5A2, Length 6,399 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-203ENST00000618828 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
COL5A2-203ENST00000618828 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
COL5A2-203ENST00000618828 NISCHQ9Y2I1 1504 aa19.32■□□□□ 0.68
COL5A2-203ENST00000618828 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
COL5A2-203ENST00000618828 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
COL5A2-203ENST00000618828 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
COL5A2-203ENST00000618828 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.55
COL5A2-203ENST00000618828 APLP2Q06481 763 aa18.37■□□□□ 0.53
COL5A2-203ENST00000618828 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
COL5A2-203ENST00000618828 RANGAP1P46060 587 aaPredicted RBP18.25■□□□□ 0.51
COL5A2-203ENST00000618828 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
COL5A2-203ENST00000618828 TRIM41Q8WV44 630 aa17.98■□□□□ 0.47
COL5A2-203ENST00000618828 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
COL5A2-203ENST00000618828 CCER1Q8TC90 406 aaPredicted RBP17.92■□□□□ 0.46
COL5A2-203ENST00000618828 PPARGC1BQ86YN6 1023 aaKnown RBP17.83■□□□□ 0.45
COL5A2-203ENST00000618828 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
COL5A2-203ENST00000618828 CENPBP07199 599 aaPredicted RBP17.74■□□□□ 0.43
COL5A2-203ENST00000618828 YTHDC1Q96MU7 727 aaKnown RBP17.73■□□□□ 0.43
COL5A2-203ENST00000618828 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
COL5A2-203ENST00000618828 ERICH6Q7L0X2 663 aa17.68■□□□□ 0.42
COL5A2-203ENST00000618828 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
COL5A2-203ENST00000618828 ITGAEP38570 1179 aa17.4■□□□□ 0.38
COL5A2-203ENST00000618828 NEFLP07196 543 aa17.39■□□□□ 0.37
COL5A2-203ENST00000618828 TRIM26Q12899 539 aaPredicted RBP17.38■□□□□ 0.37
COL5A2-203ENST00000618828 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
COL5A2-203ENST00000618828 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
COL5A2-203ENST00000618828 HRCP23327 699 aa17.23■□□□□ 0.35
COL5A2-203ENST00000618828 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
COL5A2-203ENST00000618828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
COL5A2-203ENST00000618828 CHIC1Q5VXU3 224 aa17.19■□□□□ 0.34
COL5A2-203ENST00000618828 MYT1LQ9UL68 1186 aa17.17■□□□□ 0.34
COL5A2-203ENST00000618828 MYT1Q01538 1121 aa16.92■□□□□ 0.3
COL5A2-203ENST00000618828 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL5A2-203ENST00000618828 DAXXQ9UER7 740 aaPredicted RBP16.89■□□□□ 0.29
COL5A2-203ENST00000618828 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
COL5A2-203ENST00000618828 FAM50AQ14320 339 aaKnown RBP16.87■□□□□ 0.29
COL5A2-203ENST00000618828 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
COL5A2-203ENST00000618828 ABCC9O60706 1549 aa16.81■□□□□ 0.28
COL5A2-203ENST00000618828 NEUROD1Q13562 356 aa16.8■□□□□ 0.28
COL5A2-203ENST00000618828 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
COL5A2-203ENST00000618828 BCANQ96GW7 911 aa16.7■□□□□ 0.26
COL5A2-203ENST00000618828 ZNF326Q5BKZ1 582 aaKnown RBP16.62■□□□□ 0.25
COL5A2-203ENST00000618828 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
COL5A2-203ENST00000618828 GTF3C3Q9Y5Q9 886 aa16.57■□□□□ 0.24
COL5A2-203ENST00000618828 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
COL5A2-203ENST00000618828 ARID3CA6NKF2 412 aa16.55■□□□□ 0.24
COL5A2-203ENST00000618828 FBLN2P98095 1184 aa16.54■□□□□ 0.24
COL5A2-203ENST00000618828 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
COL5A2-203ENST00000618828 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
COL5A2-203ENST00000618828 ANP32CO43423 234 aa16.47■□□□□ 0.23
COL5A2-203ENST00000618828 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
COL5A2-203ENST00000618828 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
COL5A2-203ENST00000618828 CDK11AQ9UQ88 783 aaPredicted RBP16.31■□□□□ 0.2
COL5A2-203ENST00000618828 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
COL5A2-203ENST00000618828 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
COL5A2-203ENST00000618828 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
COL5A2-203ENST00000618828 CANXP27824 592 aaKnown RBP16.25■□□□□ 0.19
COL5A2-203ENST00000618828 ACIN1Q9UKV3 1341 aaKnown RBP16.23■□□□□ 0.19
COL5A2-203ENST00000618828 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
COL5A2-203ENST00000618828 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
COL5A2-203ENST00000618828 FKBP8Q14318 412 aa16.1■□□□□ 0.17
COL5A2-203ENST00000618828 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
COL5A2-203ENST00000618828 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
COL5A2-203ENST00000618828 SALL2Q9Y467 1007 aaPredicted RBP16.07■□□□□ 0.16
COL5A2-203ENST00000618828 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
COL5A2-203ENST00000618828 CHGAP10645 457 aaKnown RBP16.06■□□□□ 0.16
COL5A2-203ENST00000618828 FAM9BQ8IZU0 186 aa16.06■□□□□ 0.16
COL5A2-203ENST00000618828 NEFMP07197 916 aa16.04■□□□□ 0.16
COL5A2-203ENST00000618828 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
COL5A2-203ENST00000618828 ANP32AP39687 249 aaKnown RBP16.02■□□□□ 0.15
COL5A2-203ENST00000618828 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.15
COL5A2-203ENST00000618828 HIRIP3Q9BW71 556 aaPredicted RBP15.98■□□□□ 0.15
COL5A2-203ENST00000618828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL5A2-203ENST00000618828 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
COL5A2-203ENST00000618828 DCAF1Q9Y4B6 1507 aa15.96■□□□□ 0.15
COL5A2-203ENST00000618828 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
COL5A2-203ENST00000618828 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
COL5A2-203ENST00000618828 KDM2AQ9Y2K7 1162 aa15.91■□□□□ 0.14
COL5A2-203ENST00000618828 IRX6P78412 446 aaPredicted RBP15.9■□□□□ 0.14
COL5A2-203ENST00000618828 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
COL5A2-203ENST00000618828 ESF1Q9H501 851 aaKnown RBP15.88■□□□□ 0.13
COL5A2-203ENST00000618828 MIER1Q8N108 512 aa15.86■□□□□ 0.13
COL5A2-203ENST00000618828 TMC1Q8TDI8 760 aa15.83■□□□□ 0.12
COL5A2-203ENST00000618828 SENP3-EIF4A1A0A087X0R7 540 aa15.82■□□□□ 0.12
COL5A2-203ENST00000618828 NBR1Q14596 966 aa15.82■□□□□ 0.12
COL5A2-203ENST00000618828 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
COL5A2-203ENST00000618828 RRP7BPQ9NSQ0 103 aa15.8■□□□□ 0.12
COL5A2-203ENST00000618828 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
COL5A2-203ENST00000618828 MRS2Q9HD23 443 aa15.79■□□□□ 0.12
COL5A2-203ENST00000618828 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
COL5A2-203ENST00000618828 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.11
COL5A2-203ENST00000618828 ARXQ96QS3 562 aa15.77■□□□□ 0.11
COL5A2-203ENST00000618828 CLIP1P30622 1438 aa15.75■□□□□ 0.11
COL5A2-203ENST00000618828 NPM1P06748 294 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL5A2-203ENST00000618828 WDR43Q15061 677 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL5A2-203ENST00000618828 EIF5BO60841 1220 aaKnown RBP15.73■□□□□ 0.11
COL5A2-203ENST00000618828 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
COL5A2-203ENST00000618828 UPF2Q9HAU5 1272 aaKnown RBP15.71■□□□□ 0.11
COL5A2-203ENST00000618828 TSPY4P0CV99 314 aa15.7■□□□□ 0.1
COL5A2-203ENST00000618828 TSPY10P0CW01 314 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms