RNA–Protein interactions for RNA: ENST00000416219.6

ATP2C2-202, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

TSL 1 (best) BASIC

Gene ATP2C2, Length 3,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-202ENST00000416219 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
ATP2C2-202ENST00000416219 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
ATP2C2-202ENST00000416219 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
ATP2C2-202ENST00000416219 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
ATP2C2-202ENST00000416219 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
ATP2C2-202ENST00000416219 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
ATP2C2-202ENST00000416219 ABCC9O60706 1549 aa22.03■■□□□ 1.12
ATP2C2-202ENST00000416219 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
ATP2C2-202ENST00000416219 SCRIBQ14160 1630 aa21.52■■□□□ 1.03
ATP2C2-202ENST00000416219 NACADO15069 1562 aa21.19■□□□□ 0.98
ATP2C2-202ENST00000416219 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
ATP2C2-202ENST00000416219 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
ATP2C2-202ENST00000416219 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
ATP2C2-202ENST00000416219 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
ATP2C2-202ENST00000416219 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
ATP2C2-202ENST00000416219 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
ATP2C2-202ENST00000416219 EHMT2Q96KQ7 1210 aa20.92■□□□□ 0.94
ATP2C2-202ENST00000416219 FAM9AQ8IZU1 332 aaPredicted RBP20.81■□□□□ 0.92
ATP2C2-202ENST00000416219 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
ATP2C2-202ENST00000416219 LOC105371045A0A1W2PR82 267 aa20.74■□□□□ 0.91
ATP2C2-202ENST00000416219 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
ATP2C2-202ENST00000416219 WIZO95785 1651 aa20.57■□□□□ 0.88
ATP2C2-202ENST00000416219 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
ATP2C2-202ENST00000416219 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
ATP2C2-202ENST00000416219 BICRAQ9NZM4 1560 aa20.39■□□□□ 0.85
ATP2C2-202ENST00000416219 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
ATP2C2-202ENST00000416219 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
ATP2C2-202ENST00000416219 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
ATP2C2-202ENST00000416219 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
ATP2C2-202ENST00000416219 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
ATP2C2-202ENST00000416219 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
ATP2C2-202ENST00000416219 ATAD2BQ9ULI0 1458 aa20.08■□□□□ 0.8
ATP2C2-202ENST00000416219 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
ATP2C2-202ENST00000416219 TTBK1Q5TCY1 1321 aaPredicted RBP20.05■□□□□ 0.8
ATP2C2-202ENST00000416219 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
ATP2C2-202ENST00000416219 RANGAP1P46060 587 aaPredicted RBP20.01■□□□□ 0.79
ATP2C2-202ENST00000416219 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
ATP2C2-202ENST00000416219 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
ATP2C2-202ENST00000416219 SOGA1O94964 1423 aa19.85■□□□□ 0.77
ATP2C2-202ENST00000416219 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
ATP2C2-202ENST00000416219 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
ATP2C2-202ENST00000416219 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
ATP2C2-202ENST00000416219 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
ATP2C2-202ENST00000416219 NCAPD3P42695 1498 aa19.71■□□□□ 0.75
ATP2C2-202ENST00000416219 TRIM26Q12899 539 aaPredicted RBP19.71■□□□□ 0.75
ATP2C2-202ENST00000416219 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
ATP2C2-202ENST00000416219 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
ATP2C2-202ENST00000416219 HRCP23327 699 aa19.55■□□□□ 0.72
ATP2C2-202ENST00000416219 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
ATP2C2-202ENST00000416219 HMGXB3Q12766 1538 aa19.52■□□□□ 0.71
ATP2C2-202ENST00000416219 CEP162Q5TB80 1403 aa19.47■□□□□ 0.71
ATP2C2-202ENST00000416219 CADPSQ9ULU8 1353 aa19.46■□□□□ 0.71
ATP2C2-202ENST00000416219 EEA1Q15075 1411 aa19.43■□□□□ 0.7
ATP2C2-202ENST00000416219 CFTRP13569 1480 aa19.42■□□□□ 0.7
ATP2C2-202ENST00000416219 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
ATP2C2-202ENST00000416219 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
ATP2C2-202ENST00000416219 NESP48681 1621 aa19.38■□□□□ 0.69
ATP2C2-202ENST00000416219 APLP2Q06481 763 aa19.35■□□□□ 0.69
ATP2C2-202ENST00000416219 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.69
ATP2C2-202ENST00000416219 CUX1P39880 1505 aa19.33■□□□□ 0.68
ATP2C2-202ENST00000416219 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
ATP2C2-202ENST00000416219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.3■□□□□ 0.68
ATP2C2-202ENST00000416219 ATP1B4Q9UN42 357 aaPredicted RBP19.27■□□□□ 0.68
ATP2C2-202ENST00000416219 CLIP1P30622 1438 aa19.27■□□□□ 0.68
ATP2C2-202ENST00000416219 TOP2BQ02880 1626 aa19.27■□□□□ 0.68
ATP2C2-202ENST00000416219 KIF27Q86VH2 1401 aa19.26■□□□□ 0.67
ATP2C2-202ENST00000416219 P3H3Q8IVL6 736 aa19.26■□□□□ 0.67
ATP2C2-202ENST00000416219 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
ATP2C2-202ENST00000416219 CUX2O14529 1486 aa19.25■□□□□ 0.67
ATP2C2-202ENST00000416219 HNRNPUL2Q1KMD3 747 aaKnown RBP19.21■□□□□ 0.67
ATP2C2-202ENST00000416219 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
ATP2C2-202ENST00000416219 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
ATP2C2-202ENST00000416219 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
ATP2C2-202ENST00000416219 IGF1RP08069 1367 aa19.11■□□□□ 0.65
ATP2C2-202ENST00000416219 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
ATP2C2-202ENST00000416219 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
ATP2C2-202ENST00000416219 CARMIL1Q5VZK9 1371 aa19.08■□□□□ 0.65
ATP2C2-202ENST00000416219 ITGAEP38570 1179 aa19.06■□□□□ 0.64
ATP2C2-202ENST00000416219 KIF21BO75037 1637 aa19.05■□□□□ 0.64
ATP2C2-202ENST00000416219 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
ATP2C2-202ENST00000416219 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.63
ATP2C2-202ENST00000416219 TOPBP1Q92547 1522 aa18.99■□□□□ 0.63
ATP2C2-202ENST00000416219 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
ATP2C2-202ENST00000416219 KANK4Q5T7N3 995 aaPredicted RBP18.98■□□□□ 0.63
ATP2C2-202ENST00000416219 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
ATP2C2-202ENST00000416219 ZEB1P37275 1124 aaPredicted RBP18.97■□□□□ 0.63
ATP2C2-202ENST00000416219 ARID3CA6NKF2 412 aa18.94■□□□□ 0.62
ATP2C2-202ENST00000416219 URB2Q14146 1524 aaKnown RBP18.92■□□□□ 0.62
ATP2C2-202ENST00000416219 FBLN2P98095 1184 aa18.9■□□□□ 0.62
ATP2C2-202ENST00000416219 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
ATP2C2-202ENST00000416219 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
ATP2C2-202ENST00000416219 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
ATP2C2-202ENST00000416219 ERICH3Q5RHP9 1530 aa18.87■□□□□ 0.61
ATP2C2-202ENST00000416219 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
ATP2C2-202ENST00000416219 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
ATP2C2-202ENST00000416219 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
ATP2C2-202ENST00000416219 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.6
ATP2C2-202ENST00000416219 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
ATP2C2-202ENST00000416219 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.6
ATP2C2-202ENST00000416219 FHOD3Q2V2M9 1422 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms