Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 TP73-AS1-205ENST00000587071 737 ntTSL 413.88□□□□□ -0.192e-12■□□□□ 9.9
DDX52Q9Y2R4 TP73-AS1-206ENST00000608600 597 ntTSL 513.47□□□□□ -0.252e-12■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.933e-7■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-209ENST00000470919 827 ntTSL 24.13□□□□□ -1.753e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-212ENST00000566617 572 ntTSL 433.68■■■□□ 2.982e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.662e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.16■■□□□ 1.622e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-205ENST00000563774 566 ntTSL 424.09■■□□□ 1.452e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.42e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-214ENST00000567266 546 ntTSL 423.78■■□□□ 1.42e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-213ENST00000567241 561 ntTSL 421.94■■□□□ 1.12e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-215ENST00000568339 2271 ntTSL 219.49■□□□□ 0.712e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-210ENST00000566115 471 ntTSL 318.17■□□□□ 0.52e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-209ENST00000565078 566 ntTSL 417.37■□□□□ 0.372e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.312e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.71■□□□□ 0.272e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-206ENST00000564544 617 ntTSL 316.03■□□□□ 0.162e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-218ENST00000570123 551 ntTSL 515.84■□□□□ 0.132e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-204ENST00000562929 452 ntTSL 514.79□□□□□ -0.042e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-211ENST00000566405 490 ntTSL 514.13□□□□□ -0.152e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-217ENST00000569997 3946 nt10.63□□□□□ -0.712e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-207ENST00000564648 1235 ntTSL 510.37□□□□□ -0.752e-7■□□□□ 9.9
DDX52Q9Y2R4 EHBP1L1-210ENST00000533465 793 ntTSL 322.51■■□□□ 1.191e-11■□□□□ 9.9
DDX52Q9Y2R4 EHBP1L1-202ENST00000526990 3169 nt13.95□□□□□ -0.181e-11■□□□□ 9.9
DDX52Q9Y2R4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.07■■□□□ 1.124e-6■□□□□ 9.9
DDX52Q9Y2R4 PRKCB-210ENST00000498739 569 ntTSL 419.9■□□□□ 0.784e-6■□□□□ 9.9
DDX52Q9Y2R4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.754e-6■□□□□ 9.9
DDX52Q9Y2R4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.114e-6■□□□□ 9.9
DDX52Q9Y2R4 GABRE-202ENST00000417300 619 ntTSL 213.98□□□□□ -0.172e-13■□□□□ 9.9
DDX52Q9Y2R4 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.724e-6■□□□□ 9.9
DDX52Q9Y2R4 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.734e-6■□□□□ 9.9
DDX52Q9Y2R4 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.754e-6■□□□□ 9.9
DDX52Q9Y2R4 GABRE-203ENST00000441219 1324 ntTSL 210.34□□□□□ -0.752e-13■□□□□ 9.9
DDX52Q9Y2R4 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.972e-13■□□□□ 9.9
DDX52Q9Y2R4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.036e-11■□□□□ 9.8
DDX52Q9Y2R4 RNA5SP225-201ENST00000410874 135 ntBASIC-1.23□□□□□ -2.617e-16■□□□□ 9.8
DDX52Q9Y2R4 ANP32A-201ENST00000267918 1084 ntTSL 317.84■□□□□ 0.452e-9■□□□□ 9.7
DDX52Q9Y2R4 ANP32A-205ENST00000483221 420 ntTSL 316.91■□□□□ 0.32e-9■□□□□ 9.7
DDX52Q9Y2R4 ANP32A-209ENST00000495764 504 ntTSL 516.91■□□□□ 0.32e-9■□□□□ 9.7
DDX52Q9Y2R4 CCT7-204ENST00000409924 567 ntTSL 323.86■■□□□ 1.412e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-211ENST00000480489 527 ntTSL 223.86■■□□□ 1.412e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.12■■□□□ 1.292e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-203ENST00000399032 593 ntTSL 423.12■■□□□ 1.292e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.71■□□□□ 0.752e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-208ENST00000471927 556 ntTSL 419.42■□□□□ 0.72e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-209ENST00000473197 595 ntTSL 419.42■□□□□ 0.72e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-206ENST00000464397 583 ntTSL 219.11■□□□□ 0.652e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.73■□□□□ 0.592e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-205ENST00000461290 1018 ntTSL 217.69■□□□□ 0.422e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-207ENST00000469844 612 ntTSL 417.19■□□□□ 0.342e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.272e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-210ENST00000473786 811 ntTSL 511.58□□□□□ -0.562e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-212ENST00000482064 567 ntTSL 410.24□□□□□ -0.772e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-214ENST00000492253 531 ntTSL 48.11□□□□□ -1.112e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.56□□□□□ -1.682e-7■□□□□ 9.7
DDX52Q9Y2R4 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.633e-32■□□□□ 9.7
DDX52Q9Y2R4 ST3GAL2-204ENST00000566097 904 ntTSL 232.82■■■□□ 2.845e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-223ENST00000492275 769 ntTSL 330.69■■■□□ 2.55e-6■□□□□ 9.7
DDX52Q9Y2R4 ST3GAL2-205ENST00000567586 557 ntTSL 429.7■■■□□ 2.355e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.85■■■□□ 2.215e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-212ENST00000463216 842 ntTSL 528.51■■■□□ 2.155e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-224ENST00000494243 861 ntTSL 528.41■■■□□ 2.145e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-217ENST00000481605 1540 ntTSL 527.87■■■□□ 2.055e-6■□□□□ 9.7
DDX52Q9Y2R4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.755e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-210ENST00000450533 2451 ntTSL 1 (best)25.26■■□□□ 1.635e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-212ENST00000480679 505 ntTSL 524.65■■□□□ 1.545e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-223ENST00000493222 864 ntTSL 324.65■■□□□ 1.545e-6■□□□□ 9.7
DDX52Q9Y2R4 FOXK2-204ENST00000527313 779 ntTSL 324.17■■□□□ 1.465e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-227ENST00000497510 722 ntTSL 423.94■■□□□ 1.425e-6■□□□□ 9.7
DDX52Q9Y2R4 ESPN-213ENST00000632803 455 ntTSL 323.47■■□□□ 1.355e-6■□□□□ 9.7
DDX52Q9Y2R4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.85■■□□□ 1.255e-6■□□□□ 9.7
DDX52Q9Y2R4 ESPN-212ENST00000632593 506 ntTSL 222.83■■□□□ 1.255e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-213ENST00000482668 645 ntTSL 322.11■■□□□ 1.135e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-219ENST00000487469 1015 ntTSL 522.04■■□□□ 1.125e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.85■■□□□ 1.095e-6■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-203ENST00000435527 746 ntTSL 321.56■■□□□ 1.045e-6■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-210ENST00000513033 567 ntTSL 421.56■■□□□ 1.045e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-215ENST00000483461 495 ntTSL 421.51■■□□□ 1.035e-6■□□□□ 9.7
DDX52Q9Y2R4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.5■■□□□ 1.035e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-205ENST00000466642 1023 ntTSL 421.33■■□□□ 1.015e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.27■□□□□ 0.845e-6■□□□□ 9.7
DDX52Q9Y2R4 ST3GAL2-203ENST00000561708 581 ntTSL 420.26■□□□□ 0.835e-6■□□□□ 9.7
DDX52Q9Y2R4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.93■□□□□ 0.785e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-214ENST00000483108 598 ntTSL 419.57■□□□□ 0.725e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-217ENST00000484142 553 ntTSL 419.57■□□□□ 0.725e-6■□□□□ 9.7
DDX52Q9Y2R4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.675e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-206ENST00000467400 717 ntTSL 519.06■□□□□ 0.645e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-209ENST00000438055 3606 ntTSL 518.85■□□□□ 0.615e-6■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-208ENST00000509151 476 ntTSL 418.84■□□□□ 0.615e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-207ENST00000418766 3771 ntTSL 517.91■□□□□ 0.465e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.443e-13■□□□□ 9.7
DDX52Q9Y2R4 RTN4-210ENST00000427710 589 ntTSL 417.68■□□□□ 0.425e-6■□□□□ 9.7
DDX52Q9Y2R4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.335e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-219ENST00000485402 3626 ntTSL 516.59■□□□□ 0.255e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.46■□□□□ 0.225e-6■□□□□ 9.7
DDX52Q9Y2R4 FOXK2-207ENST00000570585 756 ntTSL 316.34■□□□□ 0.215e-6■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.155e-6■□□□□ 9.7
DDX52Q9Y2R4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.115e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-214ENST00000548273 818 ntTSL 315.36■□□□□ 0.053e-13■□□□□ 9.7
DDX52Q9Y2R4 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.015e-6■□□□□ 9.7
Retrieved 100 of 4,483 protein–RNA pairs in 128.3 ms