Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
AP1S3Q96PC3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S3Q96PC3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S3Q96PC3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
AP1S3Q96PC3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S3Q96PC3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
AP1S3Q96PC3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 LONRF2P2-201ENST00000439212 571 ntBASIC16.26■□□□□ 0.19
AP1S3Q96PC3 DUX4L9-201ENST00000449051 1259 ntBASIC16.26■□□□□ 0.19
AP1S3Q96PC3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S3Q96PC3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S3Q96PC3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 AC079630.1-202ENST00000618127 1840 ntBASIC16.24■□□□□ 0.19
AP1S3Q96PC3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S3Q96PC3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S3Q96PC3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 AC022616.5-201ENST00000518796 181 ntBASIC16.22■□□□□ 0.19
AP1S3Q96PC3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms