Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KCNS1Q96KK3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNS1Q96KK3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.39■□□□□ 0.21
KCNS1Q96KK3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KCNS1Q96KK3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KCNS1Q96KK3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 AC010980.1-201ENST00000587192 1142 ntBASIC16.38■□□□□ 0.21
KCNS1Q96KK3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.38■□□□□ 0.21
KCNS1Q96KK3 AL353803.4-201ENST00000565882 1934 ntBASIC16.37■□□□□ 0.21
KCNS1Q96KK3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 PVT1_1.1-201ENST00000615125 194 ntBASIC16.37■□□□□ 0.21
KCNS1Q96KK3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KCNS1Q96KK3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.36■□□□□ 0.21
KCNS1Q96KK3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 AC010542.4-201ENST00000563151 1910 ntBASIC16.35■□□□□ 0.21
KCNS1Q96KK3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KCNS1Q96KK3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 YBX1P4-201ENST00000392794 808 ntBASIC16.34■□□□□ 0.21
KCNS1Q96KK3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms