Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NAF1Q96HR8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NAF1Q96HR8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
NAF1Q96HR8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
NAF1Q96HR8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.66■■□□□ 1.06
NAF1Q96HR8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NAF1Q96HR8 AC092068.2-201ENST00000590491 1708 ntBASIC21.66■■□□□ 1.06
NAF1Q96HR8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NAF1Q96HR8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NAF1Q96HR8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.65■■□□□ 1.06
NAF1Q96HR8 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.65■■□□□ 1.06
NAF1Q96HR8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NAF1Q96HR8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.65■■□□□ 1.06
NAF1Q96HR8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NAF1Q96HR8 AL138724.1-201ENST00000606771 1088 ntBASIC21.65■■□□□ 1.06
NAF1Q96HR8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NAF1Q96HR8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NAF1Q96HR8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.65■■□□□ 1.06
NAF1Q96HR8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NAF1Q96HR8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.65■■□□□ 1.06
NAF1Q96HR8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NAF1Q96HR8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
NAF1Q96HR8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NAF1Q96HR8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NAF1Q96HR8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NAF1Q96HR8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
NAF1Q96HR8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
NAF1Q96HR8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NAF1Q96HR8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NAF1Q96HR8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NAF1Q96HR8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.64■■□□□ 1.05
NAF1Q96HR8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.64■■□□□ 1.05
NAF1Q96HR8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.64■■□□□ 1.05
NAF1Q96HR8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.64■■□□□ 1.05
NAF1Q96HR8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.64■■□□□ 1.05
NAF1Q96HR8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NAF1Q96HR8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NAF1Q96HR8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NAF1Q96HR8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 AC009102.2-201ENST00000606772 1639 ntBASIC21.63■■□□□ 1.05
NAF1Q96HR8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NAF1Q96HR8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NAF1Q96HR8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
NAF1Q96HR8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NAF1Q96HR8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NAF1Q96HR8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NAF1Q96HR8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NAF1Q96HR8 HLA-L-211ENST00000482052 1765 ntBASIC21.62■■□□□ 1.05
NAF1Q96HR8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NAF1Q96HR8 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.62■■□□□ 1.05
NAF1Q96HR8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.62■■□□□ 1.05
NAF1Q96HR8 KRT18P5-201ENST00000436075 1291 ntBASIC21.62■■□□□ 1.05
NAF1Q96HR8 AC233992.3-201ENST00000607491 485 ntBASIC21.62■■□□□ 1.05
NAF1Q96HR8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.62■■□□□ 1.05
NAF1Q96HR8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.62■■□□□ 1.05
NAF1Q96HR8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NAF1Q96HR8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.62■■□□□ 1.05
NAF1Q96HR8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NAF1Q96HR8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NAF1Q96HR8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.61■■□□□ 1.05
NAF1Q96HR8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NAF1Q96HR8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NAF1Q96HR8 AC004911.1-201ENST00000416316 871 ntBASIC21.61■■□□□ 1.05
NAF1Q96HR8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.61■■□□□ 1.05
NAF1Q96HR8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.61■■□□□ 1.05
NAF1Q96HR8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NAF1Q96HR8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NAF1Q96HR8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NAF1Q96HR8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NAF1Q96HR8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms