Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 AL353803.4-201ENST00000565882 1934 ntBASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC105Q8IYK2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC105Q8IYK2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 NTF6G-201ENST00000591094 616 ntBASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CCDC105Q8IYK2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 CCDC92B-201ENST00000575506 885 ntBASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CCDC105Q8IYK2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC105Q8IYK2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.14■■□□□ 1.3
CCDC105Q8IYK2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC105Q8IYK2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC105Q8IYK2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.14■■□□□ 1.3
CCDC105Q8IYK2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC105Q8IYK2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 AC137767.1-201ENST00000602918 1920 ntBASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CCDC105Q8IYK2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CCDC105Q8IYK2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.12■■□□□ 1.29
CCDC105Q8IYK2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC105Q8IYK2 MIR6084-201ENST00000622012 110 ntBASIC23.12■■□□□ 1.29
CCDC105Q8IYK2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC105Q8IYK2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CCDC105Q8IYK2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CCDC105Q8IYK2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms