Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.57■■■□□ 2
RC3H1Q5TC82 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC27.57■■■□□ 2
RC3H1Q5TC82 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.57■■■□□ 2
RC3H1Q5TC82 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27.57■■■□□ 2
RC3H1Q5TC82 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RC3H1Q5TC82 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.57■■■□□ 2
RC3H1Q5TC82 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RC3H1Q5TC82 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.57■■■□□ 2
RC3H1Q5TC82 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.56■■■□□ 2
RC3H1Q5TC82 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
RC3H1Q5TC82 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.56■■■□□ 2
RC3H1Q5TC82 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.56■■■□□ 2
RC3H1Q5TC82 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.56■■■□□ 2
RC3H1Q5TC82 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
RC3H1Q5TC82 MIR4758-201ENST00000577688 71 ntBASIC27.56■■■□□ 2
RC3H1Q5TC82 AC008687.6-201ENST00000596318 630 ntBASIC27.56■■■□□ 2
RC3H1Q5TC82 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.56■■■□□ 2
RC3H1Q5TC82 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
RC3H1Q5TC82 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
RC3H1Q5TC82 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RC3H1Q5TC82 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.55■■■□□ 2
RC3H1Q5TC82 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.55■■■□□ 2
RC3H1Q5TC82 POU5F1P3-201ENST00000428824 1078 ntBASIC27.55■■■□□ 2
RC3H1Q5TC82 AC079089.2-201ENST00000531211 1277 ntBASIC27.55■■■□□ 2
RC3H1Q5TC82 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.55■■■□□ 2
RC3H1Q5TC82 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.55■■■□□ 2
RC3H1Q5TC82 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
RC3H1Q5TC82 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27.55■■■□□ 2
RC3H1Q5TC82 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.55■■■□□ 2
RC3H1Q5TC82 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
RC3H1Q5TC82 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
RC3H1Q5TC82 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RC3H1Q5TC82 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
RC3H1Q5TC82 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC27.54■■■□□ 2
RC3H1Q5TC82 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
RC3H1Q5TC82 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
RC3H1Q5TC82 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
RC3H1Q5TC82 AC013268.1-206ENST00000638368 961 ntBASIC27.54■■■□□ 2
RC3H1Q5TC82 AC112229.1-201ENST00000639295 961 ntBASIC27.54■■■□□ 2
RC3H1Q5TC82 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.53■■■□□ 2
RC3H1Q5TC82 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.53■■■□□ 2
RC3H1Q5TC82 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RC3H1Q5TC82 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RC3H1Q5TC82 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
RC3H1Q5TC82 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
RC3H1Q5TC82 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.53■■■□□ 2
RC3H1Q5TC82 ITM2C-210ENST00000620962 501 ntBASIC27.53■■■□□ 2
RC3H1Q5TC82 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
RC3H1Q5TC82 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
RC3H1Q5TC82 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.52■■■□□ 2
RC3H1Q5TC82 AC068338.2-201ENST00000563278 1430 ntBASIC27.52■■■□□ 2
RC3H1Q5TC82 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RC3H1Q5TC82 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.52■■■□□ 2
RC3H1Q5TC82 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.52■■■□□ 2
RC3H1Q5TC82 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.52■■■□□ 2
RC3H1Q5TC82 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RC3H1Q5TC82 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.52■■■□□ 2
RC3H1Q5TC82 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.52■■■□□ 2
RC3H1Q5TC82 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.52■■■□□ 2
RC3H1Q5TC82 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.52■■■□□ 2
RC3H1Q5TC82 TERF1P5-201ENST00000477545 1207 ntBASIC27.52■■■□□ 2
RC3H1Q5TC82 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC27.52■■■□□ 2
RC3H1Q5TC82 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC27.52■■■□□ 2
RC3H1Q5TC82 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.52■■■□□ 2
RC3H1Q5TC82 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.52■■■□□ 2
RC3H1Q5TC82 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.52■■■□□ 2
RC3H1Q5TC82 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RC3H1Q5TC82 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RC3H1Q5TC82 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
RC3H1Q5TC82 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RC3H1Q5TC82 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 MIPEPP3-201ENST00000412105 444 ntBASIC27.5■■□□□ 1.99
RC3H1Q5TC82 AC007322.4-201ENST00000509611 723 ntBASIC27.5■■□□□ 1.99
RC3H1Q5TC82 AC093827.2-201ENST00000512654 315 ntBASIC27.5■■□□□ 1.99
RC3H1Q5TC82 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.5■■□□□ 1.99
RC3H1Q5TC82 AC020928.2-201ENST00000588717 2197 ntBASIC27.49■■□□□ 1.99
RC3H1Q5TC82 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC27.49■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms