Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 AC133637.1-201ENST00000624115 1537 ntBASIC20.85■□□□□ 0.93
ATP6AP1LQ52LC2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
ATP6AP1LQ52LC2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6AP1LQ52LC2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ATP6AP1LQ52LC2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP6AP1LQ52LC2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP6AP1LQ52LC2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP6AP1LQ52LC2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6AP1LQ52LC2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 KRT16P3-201ENST00000439127 1283 ntBASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6AP1LQ52LC2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 AL031602.1-201ENST00000633169 911 ntBASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6AP1LQ52LC2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6AP1LQ52LC2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.83■□□□□ 0.92
ATP6AP1LQ52LC2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6AP1LQ52LC2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ATP6AP1LQ52LC2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.83■□□□□ 0.92
ATP6AP1LQ52LC2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6AP1LQ52LC2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6AP1LQ52LC2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP6AP1LQ52LC2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 pRNA.6-201ENST00000610482 90 ntBASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 pRNA.5-201ENST00000612139 90 ntBASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 pRNA.11-201ENST00000618423 90 ntBASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 pRNA.13-201ENST00000619112 90 ntBASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATP6AP1LQ52LC2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6AP1LQ52LC2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 AC006455.2-201ENST00000429931 906 ntBASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 AC079089.2-201ENST00000531211 1277 ntBASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6AP1LQ52LC2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms