Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6V0CP27449 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ATP6V0CP27449 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6V0CP27449 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6V0CP27449 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6V0CP27449 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP6V0CP27449 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 LONRF2P2-201ENST00000439212 571 ntBASIC17.25■□□□□ 0.35
ATP6V0CP27449 SPCS2P3-201ENST00000500401 656 ntBASIC17.25■□□□□ 0.35
ATP6V0CP27449 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATP6V0CP27449 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0CP27449 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0CP27449 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0CP27449 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0CP27449 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0CP27449 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0CP27449 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0CP27449 FEM1AP1-201ENST00000431297 1995 ntBASIC17.24■□□□□ 0.35
ATP6V0CP27449 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0CP27449 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0CP27449 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0CP27449 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP6V0CP27449 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 AC004448.1-201ENST00000458332 883 ntBASIC17.23■□□□□ 0.35
ATP6V0CP27449 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATP6V0CP27449 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP6V0CP27449 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ATP6V0CP27449 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0CP27449 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ATP6V0CP27449 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0CP27449 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0CP27449 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0CP27449 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0CP27449 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0CP27449 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP6V0CP27449 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0CP27449 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0CP27449 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP6V0CP27449 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 LINC01529-204ENST00000636474 1715 ntBASIC17.21■□□□□ 0.35
ATP6V0CP27449 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP6V0CP27449 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ATP6V0CP27449 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ATP6V0CP27449 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP6V0CP27449 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0CP27449 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms