Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-4A0A0B4J246 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-4A0A0B4J246 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.05■□□□□ 0
TRAV8-4A0A0B4J246 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-4A0A0B4J246 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 AL353803.4-201ENST00000565882 1934 ntBASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-4A0A0B4J246 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 LINC01529-204ENST00000636474 1715 ntBASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-4A0A0B4J246 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 AL451085.2-201ENST00000605085 799 ntBASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV8-4A0A0B4J246 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.02■□□□□ -0
TRAV8-4A0A0B4J246 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-4A0A0B4J246 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-4A0A0B4J246 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.02■□□□□ -0
TRAV8-4A0A0B4J246 TSPY9P-201ENST00000440215 945 ntBASIC15.02■□□□□ -0
TRAV8-4A0A0B4J246 TSPY11P-201ENST00000442607 1045 ntBASIC15.02■□□□□ -0
TRAV8-4A0A0B4J246 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-4A0A0B4J246 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV8-4A0A0B4J246 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-4A0A0B4J246 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TRAV8-4A0A0B4J246 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV8-4A0A0B4J246 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRAV8-4A0A0B4J246 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-4A0A0B4J246 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-4A0A0B4J246 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-4A0A0B4J246 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 MIR6724-1-201ENST00000616420 92 ntBASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 MIR6724-2-201ENST00000616483 92 ntBASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 MIR6724-4-201ENST00000617390 92 ntBASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 MIR6724-3-201ENST00000622482 92 ntBASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms