Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.28■■■□□ 2.76
DDX49Q9Y6V7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
DDX49Q9Y6V7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
DDX49Q9Y6V7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.26■■■□□ 2.76
DDX49Q9Y6V7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
DDX49Q9Y6V7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
DDX49Q9Y6V7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.25■■■□□ 2.75
DDX49Q9Y6V7 ABCB10P1-201ENST00000614297 2181 ntBASIC32.25■■■□□ 2.75
DDX49Q9Y6V7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
DDX49Q9Y6V7 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.24■■■□□ 2.75
DDX49Q9Y6V7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
DDX49Q9Y6V7 SUZ12P1-203ENST00000578195 985 ntBASIC32.23■■■□□ 2.75
DDX49Q9Y6V7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
DDX49Q9Y6V7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
DDX49Q9Y6V7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.22■■■□□ 2.75
DDX49Q9Y6V7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
DDX49Q9Y6V7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
DDX49Q9Y6V7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.2■■■□□ 2.75
DDX49Q9Y6V7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
DDX49Q9Y6V7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
DDX49Q9Y6V7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
DDX49Q9Y6V7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.13■■■□□ 2.73
DDX49Q9Y6V7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.12■■■□□ 2.73
DDX49Q9Y6V7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
DDX49Q9Y6V7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
DDX49Q9Y6V7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.1■■■□□ 2.73
DDX49Q9Y6V7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
DDX49Q9Y6V7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
DDX49Q9Y6V7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
DDX49Q9Y6V7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
DDX49Q9Y6V7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
DDX49Q9Y6V7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.05■■■□□ 2.72
DDX49Q9Y6V7 ABCB10P3-201ENST00000561950 2166 ntBASIC32.04■■■□□ 2.72
DDX49Q9Y6V7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.04■■■□□ 2.72
DDX49Q9Y6V7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
DDX49Q9Y6V7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.03■■■□□ 2.72
DDX49Q9Y6V7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
DDX49Q9Y6V7 CAHM-201ENST00000604200 896 ntBASIC32.02■■■□□ 2.72
DDX49Q9Y6V7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
DDX49Q9Y6V7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.72
DDX49Q9Y6V7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
DDX49Q9Y6V7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
DDX49Q9Y6V7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
DDX49Q9Y6V7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
DDX49Q9Y6V7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32■■■□□ 2.71
DDX49Q9Y6V7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.99■■■□□ 2.71
DDX49Q9Y6V7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
DDX49Q9Y6V7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
DDX49Q9Y6V7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
DDX49Q9Y6V7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.97■■■□□ 2.71
DDX49Q9Y6V7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
DDX49Q9Y6V7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
DDX49Q9Y6V7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
DDX49Q9Y6V7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.96■■■□□ 2.71
DDX49Q9Y6V7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
DDX49Q9Y6V7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
DDX49Q9Y6V7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.95■■■□□ 2.71
DDX49Q9Y6V7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
DDX49Q9Y6V7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
DDX49Q9Y6V7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
DDX49Q9Y6V7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
DDX49Q9Y6V7 RPS2P35-201ENST00000443417 897 ntBASIC31.93■■■□□ 2.7
DDX49Q9Y6V7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
DDX49Q9Y6V7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.93■■■□□ 2.7
DDX49Q9Y6V7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.93■■■□□ 2.7
DDX49Q9Y6V7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
DDX49Q9Y6V7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
DDX49Q9Y6V7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
DDX49Q9Y6V7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
DDX49Q9Y6V7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
DDX49Q9Y6V7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
DDX49Q9Y6V7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
DDX49Q9Y6V7 AL133380.1-201ENST00000506013 324 ntBASIC31.87■■■□□ 2.69
DDX49Q9Y6V7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
DDX49Q9Y6V7 AC120057.4-201ENST00000624722 1615 ntBASIC31.86■■■□□ 2.69
DDX49Q9Y6V7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.86■■■□□ 2.69
DDX49Q9Y6V7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.85■■■□□ 2.69
DDX49Q9Y6V7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.84■■■□□ 2.69
DDX49Q9Y6V7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
DDX49Q9Y6V7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
DDX49Q9Y6V7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
DDX49Q9Y6V7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.82■■■□□ 2.68
DDX49Q9Y6V7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.81■■■□□ 2.68
DDX49Q9Y6V7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
DDX49Q9Y6V7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.79■■■□□ 2.68
DDX49Q9Y6V7 AL391121.1-201ENST00000607967 1349 ntBASIC31.78■■■□□ 2.68
DDX49Q9Y6V7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
DDX49Q9Y6V7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
DDX49Q9Y6V7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
DDX49Q9Y6V7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
DDX49Q9Y6V7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
DDX49Q9Y6V7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
DDX49Q9Y6V7 AC139426.1-201ENST00000568218 2529 ntBASIC31.75■■■□□ 2.67
DDX49Q9Y6V7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.75■■■□□ 2.67
DDX49Q9Y6V7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
DDX49Q9Y6V7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
DDX49Q9Y6V7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
DDX49Q9Y6V7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
DDX49Q9Y6V7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
DDX49Q9Y6V7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms