Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
PCDHA4Q9UN74 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PCDHA4Q9UN74 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
PCDHA4Q9UN74 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHA4Q9UN74 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHA4Q9UN74 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.19■■■□□ 2.58
PCDHA4Q9UN74 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHA4Q9UN74 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
PCDHA4Q9UN74 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PCDHA4Q9UN74 WASH5P-204ENST00000632292 975 ntBASIC31.18■■■□□ 2.58
PCDHA4Q9UN74 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PCDHA4Q9UN74 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PCDHA4Q9UN74 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PCDHA4Q9UN74 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.16■■■□□ 2.58
PCDHA4Q9UN74 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
PCDHA4Q9UN74 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.13■■■□□ 2.57
PCDHA4Q9UN74 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
PCDHA4Q9UN74 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PCDHA4Q9UN74 CAHM-201ENST00000604200 896 ntBASIC31.1■■■□□ 2.57
PCDHA4Q9UN74 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.1■■■□□ 2.57
PCDHA4Q9UN74 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PCDHA4Q9UN74 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PCDHA4Q9UN74 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PCDHA4Q9UN74 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PCDHA4Q9UN74 AL391121.1-201ENST00000607967 1349 ntBASIC31.06■■■□□ 2.56
PCDHA4Q9UN74 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PCDHA4Q9UN74 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.05■■■□□ 2.56
PCDHA4Q9UN74 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.05■■■□□ 2.56
PCDHA4Q9UN74 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
PCDHA4Q9UN74 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHA4Q9UN74 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHA4Q9UN74 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHA4Q9UN74 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.01■■■□□ 2.55
PCDHA4Q9UN74 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31■■■□□ 2.55
PCDHA4Q9UN74 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHA4Q9UN74 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.99■■■□□ 2.55
PCDHA4Q9UN74 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHA4Q9UN74 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PCDHA4Q9UN74 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.98■■■□□ 2.55
PCDHA4Q9UN74 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHA4Q9UN74 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHA4Q9UN74 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
PCDHA4Q9UN74 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHA4Q9UN74 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
PCDHA4Q9UN74 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.94■■■□□ 2.54
PCDHA4Q9UN74 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.94■■■□□ 2.54
PCDHA4Q9UN74 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.92■■■□□ 2.54
PCDHA4Q9UN74 SUZ12P1-203ENST00000578195 985 ntBASIC30.92■■■□□ 2.54
PCDHA4Q9UN74 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.92■■■□□ 2.54
PCDHA4Q9UN74 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PCDHA4Q9UN74 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.91■■■□□ 2.54
PCDHA4Q9UN74 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PCDHA4Q9UN74 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.9■■■□□ 2.54
PCDHA4Q9UN74 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PCDHA4Q9UN74 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
PCDHA4Q9UN74 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCDHA4Q9UN74 AL161658.1-201ENST00000623641 1967 ntBASIC30.88■■■□□ 2.53
PCDHA4Q9UN74 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
PCDHA4Q9UN74 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHA4Q9UN74 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHA4Q9UN74 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHA4Q9UN74 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHA4Q9UN74 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.86■■■□□ 2.53
PCDHA4Q9UN74 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.86■■■□□ 2.53
PCDHA4Q9UN74 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDHA4Q9UN74 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.85■■■□□ 2.53
PCDHA4Q9UN74 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PCDHA4Q9UN74 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCDHA4Q9UN74 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.83■■■□□ 2.53
PCDHA4Q9UN74 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHA4Q9UN74 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHA4Q9UN74 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHA4Q9UN74 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHA4Q9UN74 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHA4Q9UN74 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHA4Q9UN74 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.8■■■□□ 2.52
PCDHA4Q9UN74 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHA4Q9UN74 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
PCDHA4Q9UN74 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCDHA4Q9UN74 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.79■■■□□ 2.52
PCDHA4Q9UN74 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHA4Q9UN74 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.77■■■□□ 2.52
PCDHA4Q9UN74 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PCDHA4Q9UN74 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PCDHA4Q9UN74 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PCDHA4Q9UN74 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PCDHA4Q9UN74 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHA4Q9UN74 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHA4Q9UN74 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.73■■■□□ 2.51
PCDHA4Q9UN74 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.73■■■□□ 2.51
PCDHA4Q9UN74 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
PCDHA4Q9UN74 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHA4Q9UN74 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHA4Q9UN74 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PCDHA4Q9UN74 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PCDHA4Q9UN74 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA4Q9UN74 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PCDHA4Q9UN74 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA4Q9UN74 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PCDHA4Q9UN74 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms