Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC40.06■■■■■ 4
SLC52A1Q9NWF4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC40.06■■■■■ 4
SLC52A1Q9NWF4 HLA-V-202ENST00000446817 847 ntBASIC40.05■■■■■ 4
SLC52A1Q9NWF4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC40.05■■■■■ 4
SLC52A1Q9NWF4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC40.05■■■■■ 4
SLC52A1Q9NWF4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC40.04■■■■■ 4
SLC52A1Q9NWF4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC40.03■■■■■ 4
SLC52A1Q9NWF4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC40.02■■■■■ 4
SLC52A1Q9NWF4 ZNRF2P2-203ENST00000454624 420 ntBASIC40.02■■■■■ 4
SLC52A1Q9NWF4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
SLC52A1Q9NWF4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.99■■■■□ 3.99
SLC52A1Q9NWF4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC39.99■■■■□ 3.99
SLC52A1Q9NWF4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
SLC52A1Q9NWF4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
SLC52A1Q9NWF4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC39.9■■■■□ 3.98
SLC52A1Q9NWF4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.89■■■■□ 3.98
SLC52A1Q9NWF4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.89■■■■□ 3.98
SLC52A1Q9NWF4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
SLC52A1Q9NWF4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
SLC52A1Q9NWF4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
SLC52A1Q9NWF4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
SLC52A1Q9NWF4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC39.85■■■■□ 3.97
SLC52A1Q9NWF4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
SLC52A1Q9NWF4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
SLC52A1Q9NWF4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC39.83■■■■□ 3.97
SLC52A1Q9NWF4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.83■■■■□ 3.97
SLC52A1Q9NWF4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC39.83■■■■□ 3.97
SLC52A1Q9NWF4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.82■■■■□ 3.97
SLC52A1Q9NWF4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
SLC52A1Q9NWF4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC39.81■■■■□ 3.96
SLC52A1Q9NWF4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC39.81■■■■□ 3.96
SLC52A1Q9NWF4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
SLC52A1Q9NWF4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39.8■■■■□ 3.96
SLC52A1Q9NWF4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC39.78■■■■□ 3.96
SLC52A1Q9NWF4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.74■■■■□ 3.95
SLC52A1Q9NWF4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.74■■■■□ 3.95
SLC52A1Q9NWF4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
SLC52A1Q9NWF4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
SLC52A1Q9NWF4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
SLC52A1Q9NWF4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
SLC52A1Q9NWF4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC39.71■■■■□ 3.95
SLC52A1Q9NWF4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC39.7■■■■□ 3.95
SLC52A1Q9NWF4 DUX4L29-201ENST00000425409 679 ntBASIC39.69■■■■□ 3.94
SLC52A1Q9NWF4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC39.68■■■■□ 3.94
SLC52A1Q9NWF4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.68■■■■□ 3.94
SLC52A1Q9NWF4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC39.68■■■■□ 3.94
SLC52A1Q9NWF4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC39.65■■■■□ 3.94
SLC52A1Q9NWF4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
SLC52A1Q9NWF4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
SLC52A1Q9NWF4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC39.65■■■■□ 3.94
SLC52A1Q9NWF4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
SLC52A1Q9NWF4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.64■■■■□ 3.94
SLC52A1Q9NWF4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
SLC52A1Q9NWF4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
SLC52A1Q9NWF4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC39.62■■■■□ 3.93
SLC52A1Q9NWF4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC39.62■■■■□ 3.93
SLC52A1Q9NWF4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
SLC52A1Q9NWF4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
SLC52A1Q9NWF4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC39.6■■■■□ 3.93
SLC52A1Q9NWF4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
SLC52A1Q9NWF4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
SLC52A1Q9NWF4 AC021231.2-201ENST00000594613 730 ntBASIC39.56■■■■□ 3.92
SLC52A1Q9NWF4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC39.55■■■■□ 3.92
SLC52A1Q9NWF4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
SLC52A1Q9NWF4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
SLC52A1Q9NWF4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC39.52■■■■□ 3.92
SLC52A1Q9NWF4 MIR4449-201ENST00000578365 66 ntBASIC39.52■■■■□ 3.92
SLC52A1Q9NWF4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC39.51■■■■□ 3.92
SLC52A1Q9NWF4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC39.51■■■■□ 3.92
SLC52A1Q9NWF4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.91
SLC52A1Q9NWF4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
SLC52A1Q9NWF4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.5■■■■□ 3.91
SLC52A1Q9NWF4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
SLC52A1Q9NWF4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
SLC52A1Q9NWF4 MIR639-201ENST00000384974 98 ntBASIC39.46■■■■□ 3.91
SLC52A1Q9NWF4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
SLC52A1Q9NWF4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC39.45■■■■□ 3.91
SLC52A1Q9NWF4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC39.45■■■■□ 3.91
SLC52A1Q9NWF4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
SLC52A1Q9NWF4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
SLC52A1Q9NWF4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC39.42■■■■□ 3.9
SLC52A1Q9NWF4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
SLC52A1Q9NWF4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC39.41■■■■□ 3.9
SLC52A1Q9NWF4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC39.4■■■■□ 3.9
SLC52A1Q9NWF4 AC108673.1-201ENST00000510422 1159 ntBASIC39.38■■■■□ 3.89
SLC52A1Q9NWF4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC39.38■■■■□ 3.89
SLC52A1Q9NWF4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
SLC52A1Q9NWF4 MIR6090-201ENST00000622481 60 ntBASIC39.36■■■■□ 3.89
SLC52A1Q9NWF4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC39.35■■■■□ 3.89
SLC52A1Q9NWF4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
SLC52A1Q9NWF4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC39.35■■■■□ 3.89
SLC52A1Q9NWF4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
SLC52A1Q9NWF4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC39.35■■■■□ 3.89
SLC52A1Q9NWF4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC39.34■■■■□ 3.89
SLC52A1Q9NWF4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
SLC52A1Q9NWF4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC39.32■■■■□ 3.89
SLC52A1Q9NWF4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC39.31■■■■□ 3.88
SLC52A1Q9NWF4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC39.3■■■■□ 3.88
SLC52A1Q9NWF4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
SLC52A1Q9NWF4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC39.3■■■■□ 3.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms