Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.64■■■□□ 2.66
RBM28Q9NW13 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
RBM28Q9NW13 WASH5P-204ENST00000632292 975 ntBASIC31.64■■■□□ 2.66
RBM28Q9NW13 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RBM28Q9NW13 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RBM28Q9NW13 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RBM28Q9NW13 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.6■■■□□ 2.65
RBM28Q9NW13 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RBM28Q9NW13 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RBM28Q9NW13 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RBM28Q9NW13 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.58■■■□□ 2.65
RBM28Q9NW13 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RBM28Q9NW13 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
RBM28Q9NW13 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.56■■■□□ 2.64
RBM28Q9NW13 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RBM28Q9NW13 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RBM28Q9NW13 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RBM28Q9NW13 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
RBM28Q9NW13 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.53■■■□□ 2.64
RBM28Q9NW13 CAHM-201ENST00000604200 896 ntBASIC31.53■■■□□ 2.64
RBM28Q9NW13 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RBM28Q9NW13 AL391121.1-201ENST00000607967 1349 ntBASIC31.52■■■□□ 2.64
RBM28Q9NW13 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RBM28Q9NW13 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RBM28Q9NW13 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RBM28Q9NW13 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RBM28Q9NW13 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RBM28Q9NW13 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RBM28Q9NW13 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RBM28Q9NW13 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.46■■■□□ 2.63
RBM28Q9NW13 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
RBM28Q9NW13 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
RBM28Q9NW13 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
RBM28Q9NW13 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RBM28Q9NW13 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.44■■■□□ 2.62
RBM28Q9NW13 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.43■■■□□ 2.62
RBM28Q9NW13 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RBM28Q9NW13 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RBM28Q9NW13 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.42■■■□□ 2.62
RBM28Q9NW13 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.42■■■□□ 2.62
RBM28Q9NW13 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
RBM28Q9NW13 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RBM28Q9NW13 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.41■■■□□ 2.62
RBM28Q9NW13 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.39■■■□□ 2.62
RBM28Q9NW13 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RBM28Q9NW13 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.36■■■□□ 2.61
RBM28Q9NW13 SUZ12P1-203ENST00000578195 985 ntBASIC31.36■■■□□ 2.61
RBM28Q9NW13 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
RBM28Q9NW13 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RBM28Q9NW13 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.32■■■□□ 2.6
RBM28Q9NW13 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.32■■■□□ 2.6
RBM28Q9NW13 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RBM28Q9NW13 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RBM28Q9NW13 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RBM28Q9NW13 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RBM28Q9NW13 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RBM28Q9NW13 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.28■■■□□ 2.6
RBM28Q9NW13 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RBM28Q9NW13 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.28■■■□□ 2.6
RBM28Q9NW13 AL161658.1-201ENST00000623641 1967 ntBASIC31.28■■■□□ 2.6
RBM28Q9NW13 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RBM28Q9NW13 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RBM28Q9NW13 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.26■■■□□ 2.59
RBM28Q9NW13 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RBM28Q9NW13 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.24■■■□□ 2.59
RBM28Q9NW13 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RBM28Q9NW13 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RBM28Q9NW13 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RBM28Q9NW13 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.23■■■□□ 2.59
RBM28Q9NW13 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RBM28Q9NW13 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RBM28Q9NW13 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RBM28Q9NW13 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
RBM28Q9NW13 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.21■■■□□ 2.59
RBM28Q9NW13 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RBM28Q9NW13 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RBM28Q9NW13 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RBM28Q9NW13 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
RBM28Q9NW13 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.18■■■□□ 2.58
RBM28Q9NW13 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.18■■■□□ 2.58
RBM28Q9NW13 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
RBM28Q9NW13 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RBM28Q9NW13 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
RBM28Q9NW13 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
RBM28Q9NW13 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RBM28Q9NW13 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RBM28Q9NW13 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.15■■■□□ 2.58
RBM28Q9NW13 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RBM28Q9NW13 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RBM28Q9NW13 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
RBM28Q9NW13 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RBM28Q9NW13 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RBM28Q9NW13 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RBM28Q9NW13 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.14■■■□□ 2.58
RBM28Q9NW13 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RBM28Q9NW13 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RBM28Q9NW13 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.13■■■□□ 2.57
RBM28Q9NW13 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
RBM28Q9NW13 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RBM28Q9NW13 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms