Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.64■■■□□ 2.66
RBM28Q9NW13 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
RBM28Q9NW13 WASH5P-204ENST00000632292 975 ntBASIC31.64■■■□□ 2.66
RBM28Q9NW13 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RBM28Q9NW13 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RBM28Q9NW13 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RBM28Q9NW13 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.6■■■□□ 2.65
RBM28Q9NW13 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RBM28Q9NW13 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RBM28Q9NW13 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RBM28Q9NW13 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.58■■■□□ 2.65
RBM28Q9NW13 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RBM28Q9NW13 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
RBM28Q9NW13 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.56■■■□□ 2.64
RBM28Q9NW13 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RBM28Q9NW13 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RBM28Q9NW13 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RBM28Q9NW13 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
RBM28Q9NW13 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.53■■■□□ 2.64
RBM28Q9NW13 CAHM-201ENST00000604200 896 ntBASIC31.53■■■□□ 2.64
RBM28Q9NW13 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RBM28Q9NW13 AL391121.1-201ENST00000607967 1349 ntBASIC31.52■■■□□ 2.64
RBM28Q9NW13 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RBM28Q9NW13 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RBM28Q9NW13 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RBM28Q9NW13 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RBM28Q9NW13 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RBM28Q9NW13 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RBM28Q9NW13 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RBM28Q9NW13 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.46■■■□□ 2.63
RBM28Q9NW13 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
RBM28Q9NW13 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
RBM28Q9NW13 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
RBM28Q9NW13 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RBM28Q9NW13 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.44■■■□□ 2.62
RBM28Q9NW13 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.43■■■□□ 2.62
RBM28Q9NW13 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RBM28Q9NW13 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RBM28Q9NW13 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.42■■■□□ 2.62
RBM28Q9NW13 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.42■■■□□ 2.62
RBM28Q9NW13 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
RBM28Q9NW13 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RBM28Q9NW13 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.41■■■□□ 2.62
RBM28Q9NW13 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.39■■■□□ 2.62
RBM28Q9NW13 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RBM28Q9NW13 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.36■■■□□ 2.61
RBM28Q9NW13 SUZ12P1-203ENST00000578195 985 ntBASIC31.36■■■□□ 2.61
RBM28Q9NW13 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
RBM28Q9NW13 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RBM28Q9NW13 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.32■■■□□ 2.6
RBM28Q9NW13 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.32■■■□□ 2.6
RBM28Q9NW13 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RBM28Q9NW13 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RBM28Q9NW13 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RBM28Q9NW13 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RBM28Q9NW13 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RBM28Q9NW13 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.28■■■□□ 2.6
RBM28Q9NW13 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RBM28Q9NW13 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.28■■■□□ 2.6
RBM28Q9NW13 AL161658.1-201ENST00000623641 1967 ntBASIC31.28■■■□□ 2.6
RBM28Q9NW13 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RBM28Q9NW13 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RBM28Q9NW13 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.26■■■□□ 2.59
RBM28Q9NW13 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RBM28Q9NW13 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.24■■■□□ 2.59
RBM28Q9NW13 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RBM28Q9NW13 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RBM28Q9NW13 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RBM28Q9NW13 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.23■■■□□ 2.59
RBM28Q9NW13 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RBM28Q9NW13 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RBM28Q9NW13 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RBM28Q9NW13 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
RBM28Q9NW13 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.21■■■□□ 2.59
RBM28Q9NW13 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RBM28Q9NW13 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RBM28Q9NW13 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RBM28Q9NW13 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
RBM28Q9NW13 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.18■■■□□ 2.58
RBM28Q9NW13 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.18■■■□□ 2.58
RBM28Q9NW13 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
RBM28Q9NW13 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RBM28Q9NW13 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
RBM28Q9NW13 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
RBM28Q9NW13 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RBM28Q9NW13 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RBM28Q9NW13 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.15■■■□□ 2.58
RBM28Q9NW13 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RBM28Q9NW13 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RBM28Q9NW13 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
RBM28Q9NW13 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RBM28Q9NW13 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RBM28Q9NW13 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RBM28Q9NW13 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.14■■■□□ 2.58
RBM28Q9NW13 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RBM28Q9NW13 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RBM28Q9NW13 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.13■■■□□ 2.57
RBM28Q9NW13 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
RBM28Q9NW13 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RBM28Q9NW13 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms