Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ZNRF2P1-201ENST00000441407 443 ntBASIC23.87■■□□□ 1.41
COMMD4Q9H0A8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.87■■□□□ 1.41
COMMD4Q9H0A8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COMMD4Q9H0A8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COMMD4Q9H0A8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COMMD4Q9H0A8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.85■■□□□ 1.41
COMMD4Q9H0A8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COMMD4Q9H0A8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.83■■□□□ 1.41
COMMD4Q9H0A8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COMMD4Q9H0A8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.82■■□□□ 1.4
COMMD4Q9H0A8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
COMMD4Q9H0A8 ABCB10P3-201ENST00000561950 2166 ntBASIC23.82■■□□□ 1.4
COMMD4Q9H0A8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COMMD4Q9H0A8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.81■■□□□ 1.4
COMMD4Q9H0A8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COMMD4Q9H0A8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
COMMD4Q9H0A8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COMMD4Q9H0A8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COMMD4Q9H0A8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COMMD4Q9H0A8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COMMD4Q9H0A8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COMMD4Q9H0A8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
COMMD4Q9H0A8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COMMD4Q9H0A8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
COMMD4Q9H0A8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.76■■□□□ 1.39
COMMD4Q9H0A8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COMMD4Q9H0A8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COMMD4Q9H0A8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.75■■□□□ 1.39
COMMD4Q9H0A8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COMMD4Q9H0A8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COMMD4Q9H0A8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
COMMD4Q9H0A8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COMMD4Q9H0A8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COMMD4Q9H0A8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COMMD4Q9H0A8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COMMD4Q9H0A8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
COMMD4Q9H0A8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
COMMD4Q9H0A8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COMMD4Q9H0A8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COMMD4Q9H0A8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
COMMD4Q9H0A8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COMMD4Q9H0A8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COMMD4Q9H0A8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
COMMD4Q9H0A8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.68■■□□□ 1.38
COMMD4Q9H0A8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COMMD4Q9H0A8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COMMD4Q9H0A8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COMMD4Q9H0A8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.66■■□□□ 1.38
COMMD4Q9H0A8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COMMD4Q9H0A8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COMMD4Q9H0A8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COMMD4Q9H0A8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COMMD4Q9H0A8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COMMD4Q9H0A8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.62■■□□□ 1.37
COMMD4Q9H0A8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COMMD4Q9H0A8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
COMMD4Q9H0A8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COMMD4Q9H0A8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COMMD4Q9H0A8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COMMD4Q9H0A8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.6■■□□□ 1.37
COMMD4Q9H0A8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COMMD4Q9H0A8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COMMD4Q9H0A8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COMMD4Q9H0A8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COMMD4Q9H0A8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.57■■□□□ 1.36
COMMD4Q9H0A8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COMMD4Q9H0A8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
COMMD4Q9H0A8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COMMD4Q9H0A8 DYNLL1-208ENST00000550178 581 ntBASIC23.56■■□□□ 1.36
COMMD4Q9H0A8 AL161658.1-201ENST00000623641 1967 ntBASIC23.56■■□□□ 1.36
COMMD4Q9H0A8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COMMD4Q9H0A8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.55■■□□□ 1.36
COMMD4Q9H0A8 AC139426.1-201ENST00000568218 2529 ntBASIC23.55■■□□□ 1.36
COMMD4Q9H0A8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
COMMD4Q9H0A8 ST7-AS1-201ENST00000456775 1889 ntBASIC23.53■■□□□ 1.36
COMMD4Q9H0A8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COMMD4Q9H0A8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COMMD4Q9H0A8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COMMD4Q9H0A8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
COMMD4Q9H0A8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COMMD4Q9H0A8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.51■■□□□ 1.35
COMMD4Q9H0A8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COMMD4Q9H0A8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COMMD4Q9H0A8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COMMD4Q9H0A8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
COMMD4Q9H0A8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
COMMD4Q9H0A8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
COMMD4Q9H0A8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
COMMD4Q9H0A8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
COMMD4Q9H0A8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COMMD4Q9H0A8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COMMD4Q9H0A8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
COMMD4Q9H0A8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
COMMD4Q9H0A8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COMMD4Q9H0A8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
COMMD4Q9H0A8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COMMD4Q9H0A8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COMMD4Q9H0A8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
COMMD4Q9H0A8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.43■■□□□ 1.34
COMMD4Q9H0A8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms