Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTL8AQ9BWD3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTL8AQ9BWD3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.15■■□□□ 1.3
RTL8AQ9BWD3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTL8AQ9BWD3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTL8AQ9BWD3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.13■■□□□ 1.29
RTL8AQ9BWD3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTL8AQ9BWD3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL8AQ9BWD3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL8AQ9BWD3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RTL8AQ9BWD3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTL8AQ9BWD3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTL8AQ9BWD3 AL133380.1-201ENST00000506013 324 ntBASIC23.09■■□□□ 1.29
RTL8AQ9BWD3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.08■■□□□ 1.29
RTL8AQ9BWD3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTL8AQ9BWD3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL8AQ9BWD3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL8AQ9BWD3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.07■■□□□ 1.28
RTL8AQ9BWD3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTL8AQ9BWD3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.06■■□□□ 1.28
RTL8AQ9BWD3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL8AQ9BWD3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL8AQ9BWD3 SETD8P1-201ENST00000623146 1180 ntBASIC23.04■■□□□ 1.28
RTL8AQ9BWD3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL8AQ9BWD3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL8AQ9BWD3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTL8AQ9BWD3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL8AQ9BWD3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL8AQ9BWD3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTL8AQ9BWD3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
RTL8AQ9BWD3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL8AQ9BWD3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
RTL8AQ9BWD3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL8AQ9BWD3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RTL8AQ9BWD3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL8AQ9BWD3 WASH5P-204ENST00000632292 975 ntBASIC23■■□□□ 1.27
RTL8AQ9BWD3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTL8AQ9BWD3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTL8AQ9BWD3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL8AQ9BWD3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL8AQ9BWD3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTL8AQ9BWD3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.98■■□□□ 1.27
RTL8AQ9BWD3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RTL8AQ9BWD3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RTL8AQ9BWD3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTL8AQ9BWD3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
RTL8AQ9BWD3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTL8AQ9BWD3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTL8AQ9BWD3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.93■■□□□ 1.26
RTL8AQ9BWD3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
RTL8AQ9BWD3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RTL8AQ9BWD3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.93■■□□□ 1.26
RTL8AQ9BWD3 AL161658.1-201ENST00000623641 1967 ntBASIC22.92■■□□□ 1.26
RTL8AQ9BWD3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTL8AQ9BWD3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTL8AQ9BWD3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTL8AQ9BWD3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTL8AQ9BWD3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTL8AQ9BWD3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTL8AQ9BWD3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTL8AQ9BWD3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.88■■□□□ 1.25
RTL8AQ9BWD3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTL8AQ9BWD3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTL8AQ9BWD3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTL8AQ9BWD3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTL8AQ9BWD3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.85■■□□□ 1.25
RTL8AQ9BWD3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.85■■□□□ 1.25
RTL8AQ9BWD3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTL8AQ9BWD3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RTL8AQ9BWD3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTL8AQ9BWD3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTL8AQ9BWD3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTL8AQ9BWD3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
RTL8AQ9BWD3 AC097358.2-201ENST00000607541 1159 ntBASIC22.83■■□□□ 1.25
RTL8AQ9BWD3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.83■■□□□ 1.25
RTL8AQ9BWD3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
RTL8AQ9BWD3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.81■■□□□ 1.24
RTL8AQ9BWD3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
RTL8AQ9BWD3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RTL8AQ9BWD3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
RTL8AQ9BWD3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTL8AQ9BWD3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTL8AQ9BWD3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
RTL8AQ9BWD3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RTL8AQ9BWD3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RTL8AQ9BWD3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RTL8AQ9BWD3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.78■■□□□ 1.24
RTL8AQ9BWD3 AC136428.2-201ENST00000563187 214 ntBASIC22.78■■□□□ 1.24
RTL8AQ9BWD3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTL8AQ9BWD3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RTL8AQ9BWD3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
RTL8AQ9BWD3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL8AQ9BWD3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTL8AQ9BWD3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RTL8AQ9BWD3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
RTL8AQ9BWD3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
RTL8AQ9BWD3 AL391121.1-201ENST00000607967 1349 ntBASIC22.75■■□□□ 1.23
RTL8AQ9BWD3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTL8AQ9BWD3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
RTL8AQ9BWD3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms