Protein–RNA interactions for Protein: Q96FZ2

HMCES, Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCESQ96FZ2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
HMCESQ96FZ2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
HMCESQ96FZ2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
HMCESQ96FZ2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
HMCESQ96FZ2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.85■■■□□ 2.05
HMCESQ96FZ2 CAHM-201ENST00000604200 896 ntBASIC27.85■■■□□ 2.05
HMCESQ96FZ2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
HMCESQ96FZ2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.83■■■□□ 2.05
HMCESQ96FZ2 WASH5P-204ENST00000632292 975 ntBASIC27.83■■■□□ 2.05
HMCESQ96FZ2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
HMCESQ96FZ2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
HMCESQ96FZ2 AL391121.1-201ENST00000607967 1349 ntBASIC27.8■■■□□ 2.04
HMCESQ96FZ2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
HMCESQ96FZ2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
HMCESQ96FZ2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
HMCESQ96FZ2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
HMCESQ96FZ2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
HMCESQ96FZ2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
HMCESQ96FZ2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
HMCESQ96FZ2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
HMCESQ96FZ2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
HMCESQ96FZ2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.74■■■□□ 2.03
HMCESQ96FZ2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
HMCESQ96FZ2 SUZ12P1-203ENST00000578195 985 ntBASIC27.73■■■□□ 2.03
HMCESQ96FZ2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
HMCESQ96FZ2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
HMCESQ96FZ2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.72■■■□□ 2.03
HMCESQ96FZ2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.72■■■□□ 2.03
HMCESQ96FZ2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
HMCESQ96FZ2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
HMCESQ96FZ2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
HMCESQ96FZ2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
HMCESQ96FZ2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
HMCESQ96FZ2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
HMCESQ96FZ2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.69■■■□□ 2.02
HMCESQ96FZ2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
HMCESQ96FZ2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
HMCESQ96FZ2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.66■■■□□ 2.02
HMCESQ96FZ2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
HMCESQ96FZ2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
HMCESQ96FZ2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.62■■■□□ 2.01
HMCESQ96FZ2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
HMCESQ96FZ2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
HMCESQ96FZ2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
HMCESQ96FZ2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.59■■■□□ 2.01
HMCESQ96FZ2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
HMCESQ96FZ2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
HMCESQ96FZ2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.58■■■□□ 2.01
HMCESQ96FZ2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.57■■■□□ 2
HMCESQ96FZ2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
HMCESQ96FZ2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.57■■■□□ 2
HMCESQ96FZ2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
HMCESQ96FZ2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
HMCESQ96FZ2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
HMCESQ96FZ2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HMCESQ96FZ2 AL161658.1-201ENST00000623641 1967 ntBASIC27.54■■■□□ 2
HMCESQ96FZ2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.53■■■□□ 2
HMCESQ96FZ2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
HMCESQ96FZ2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.52■■■□□ 2
HMCESQ96FZ2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
HMCESQ96FZ2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
HMCESQ96FZ2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.5■■□□□ 1.99
HMCESQ96FZ2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.5■■□□□ 1.99
HMCESQ96FZ2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
HMCESQ96FZ2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
HMCESQ96FZ2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
HMCESQ96FZ2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
HMCESQ96FZ2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
HMCESQ96FZ2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.48■■□□□ 1.99
HMCESQ96FZ2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HMCESQ96FZ2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HMCESQ96FZ2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HMCESQ96FZ2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
HMCESQ96FZ2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.46■■□□□ 1.99
HMCESQ96FZ2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
HMCESQ96FZ2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.44■■□□□ 1.98
HMCESQ96FZ2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.44■■□□□ 1.98
HMCESQ96FZ2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
HMCESQ96FZ2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
HMCESQ96FZ2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
HMCESQ96FZ2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
HMCESQ96FZ2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
HMCESQ96FZ2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
HMCESQ96FZ2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
HMCESQ96FZ2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.43■■□□□ 1.98
HMCESQ96FZ2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.42■■□□□ 1.98
HMCESQ96FZ2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
HMCESQ96FZ2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
HMCESQ96FZ2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
HMCESQ96FZ2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
HMCESQ96FZ2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
HMCESQ96FZ2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
HMCESQ96FZ2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
HMCESQ96FZ2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.4■■□□□ 1.98
HMCESQ96FZ2 MIR762-201ENST00000390236 83 ntBASIC27.4■■□□□ 1.98
HMCESQ96FZ2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HMCESQ96FZ2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HMCESQ96FZ2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.39■■□□□ 1.98
HMCESQ96FZ2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.39■■□□□ 1.98
HMCESQ96FZ2 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.39■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms