Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ABCB10P3-201ENST00000561950 2166 ntBASIC23.47■■□□□ 1.35
FOXRED1Q96CU9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXRED1Q96CU9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.47■■□□□ 1.35
FOXRED1Q96CU9 AP002365.1-201ENST00000603448 772 ntBASIC23.47■■□□□ 1.35
FOXRED1Q96CU9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXRED1Q96CU9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
FOXRED1Q96CU9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXRED1Q96CU9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.46■■□□□ 1.35
FOXRED1Q96CU9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
FOXRED1Q96CU9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
FOXRED1Q96CU9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.44■■□□□ 1.34
FOXRED1Q96CU9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.44■■□□□ 1.34
FOXRED1Q96CU9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
FOXRED1Q96CU9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.43■■□□□ 1.34
FOXRED1Q96CU9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
FOXRED1Q96CU9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
FOXRED1Q96CU9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
FOXRED1Q96CU9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.41■■□□□ 1.34
FOXRED1Q96CU9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
FOXRED1Q96CU9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
FOXRED1Q96CU9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
FOXRED1Q96CU9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
FOXRED1Q96CU9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
FOXRED1Q96CU9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
FOXRED1Q96CU9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
FOXRED1Q96CU9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXRED1Q96CU9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXRED1Q96CU9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
FOXRED1Q96CU9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FOXRED1Q96CU9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXRED1Q96CU9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXRED1Q96CU9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
FOXRED1Q96CU9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXRED1Q96CU9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
FOXRED1Q96CU9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.34■■□□□ 1.33
FOXRED1Q96CU9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXRED1Q96CU9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
FOXRED1Q96CU9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXRED1Q96CU9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXRED1Q96CU9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
FOXRED1Q96CU9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
FOXRED1Q96CU9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
FOXRED1Q96CU9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
FOXRED1Q96CU9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXRED1Q96CU9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXRED1Q96CU9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXRED1Q96CU9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
FOXRED1Q96CU9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXRED1Q96CU9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXRED1Q96CU9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXRED1Q96CU9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.28■■□□□ 1.32
FOXRED1Q96CU9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXRED1Q96CU9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.28■■□□□ 1.32
FOXRED1Q96CU9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FOXRED1Q96CU9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXRED1Q96CU9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
FOXRED1Q96CU9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.25■■□□□ 1.31
FOXRED1Q96CU9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXRED1Q96CU9 DYNLL1-208ENST00000550178 581 ntBASIC23.25■■□□□ 1.31
FOXRED1Q96CU9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXRED1Q96CU9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXRED1Q96CU9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.24■■□□□ 1.31
FOXRED1Q96CU9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXRED1Q96CU9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXRED1Q96CU9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FOXRED1Q96CU9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FOXRED1Q96CU9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
FOXRED1Q96CU9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FOXRED1Q96CU9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.21■■□□□ 1.31
FOXRED1Q96CU9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
FOXRED1Q96CU9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
FOXRED1Q96CU9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FOXRED1Q96CU9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
FOXRED1Q96CU9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FOXRED1Q96CU9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FOXRED1Q96CU9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.2■■□□□ 1.3
FOXRED1Q96CU9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FOXRED1Q96CU9 ST7-AS1-201ENST00000456775 1889 ntBASIC23.19■■□□□ 1.3
FOXRED1Q96CU9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXRED1Q96CU9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.19■■□□□ 1.3
FOXRED1Q96CU9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXRED1Q96CU9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.18■■□□□ 1.3
FOXRED1Q96CU9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
FOXRED1Q96CU9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.18■■□□□ 1.3
FOXRED1Q96CU9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXRED1Q96CU9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
FOXRED1Q96CU9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
FOXRED1Q96CU9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXRED1Q96CU9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXRED1Q96CU9 AL161658.1-201ENST00000623641 1967 ntBASIC23.15■■□□□ 1.3
FOXRED1Q96CU9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXRED1Q96CU9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FOXRED1Q96CU9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FOXRED1Q96CU9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXRED1Q96CU9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
FOXRED1Q96CU9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXRED1Q96CU9 AC139426.1-201ENST00000568218 2529 ntBASIC23.12■■□□□ 1.29
FOXRED1Q96CU9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
FOXRED1Q96CU9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXRED1Q96CU9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms