Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
GBF1Q92538 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
GBF1Q92538 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.92■■■□□ 2.38
GBF1Q92538 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.91■■■□□ 2.38
GBF1Q92538 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.91■■■□□ 2.38
GBF1Q92538 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
GBF1Q92538 MIR4449-201ENST00000578365 66 ntBASIC29.88■■■□□ 2.37
GBF1Q92538 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
GBF1Q92538 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
GBF1Q92538 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
GBF1Q92538 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
GBF1Q92538 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
GBF1Q92538 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
GBF1Q92538 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.84■■■□□ 2.37
GBF1Q92538 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
GBF1Q92538 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.82■■■□□ 2.36
GBF1Q92538 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
GBF1Q92538 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
GBF1Q92538 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.79■■■□□ 2.36
GBF1Q92538 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
GBF1Q92538 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
GBF1Q92538 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
GBF1Q92538 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
GBF1Q92538 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
GBF1Q92538 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
GBF1Q92538 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.75■■■□□ 2.35
GBF1Q92538 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
GBF1Q92538 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
GBF1Q92538 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
GBF1Q92538 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
GBF1Q92538 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.72■■■□□ 2.35
GBF1Q92538 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
GBF1Q92538 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
GBF1Q92538 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
GBF1Q92538 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
GBF1Q92538 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.68■■■□□ 2.34
GBF1Q92538 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.68■■■□□ 2.34
GBF1Q92538 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.67■■■□□ 2.34
GBF1Q92538 DUX4L29-201ENST00000425409 679 ntBASIC29.66■■■□□ 2.34
GBF1Q92538 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.66■■■□□ 2.34
GBF1Q92538 AC016575.1-201ENST00000607026 382 ntBASIC29.66■■■□□ 2.34
GBF1Q92538 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
GBF1Q92538 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
GBF1Q92538 HSD17B1P1-201ENST00000590052 955 ntBASIC29.65■■■□□ 2.34
GBF1Q92538 WASH5P-204ENST00000632292 975 ntBASIC29.65■■■□□ 2.34
GBF1Q92538 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.64■■■□□ 2.34
GBF1Q92538 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.63■■■□□ 2.33
GBF1Q92538 MIR639-201ENST00000384974 98 ntBASIC29.63■■■□□ 2.33
GBF1Q92538 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
GBF1Q92538 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
GBF1Q92538 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
GBF1Q92538 MIR3648-2-201ENST00000581792 180 ntBASIC29.59■■■□□ 2.33
GBF1Q92538 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.59■■■□□ 2.33
GBF1Q92538 MIR3648-1-201ENST00000615959 180 ntBASIC29.59■■■□□ 2.33
GBF1Q92538 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
GBF1Q92538 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
GBF1Q92538 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
GBF1Q92538 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
GBF1Q92538 CR559946.2-201ENST00000623684 991 ntBASIC29.57■■■□□ 2.32
GBF1Q92538 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
GBF1Q92538 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
GBF1Q92538 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
GBF1Q92538 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
GBF1Q92538 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.55■■■□□ 2.32
GBF1Q92538 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
GBF1Q92538 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.55■■■□□ 2.32
GBF1Q92538 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
GBF1Q92538 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.53■■■□□ 2.32
GBF1Q92538 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
GBF1Q92538 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
GBF1Q92538 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.51■■■□□ 2.31
GBF1Q92538 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.51■■■□□ 2.31
GBF1Q92538 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.5■■■□□ 2.31
GBF1Q92538 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.5■■■□□ 2.31
GBF1Q92538 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
GBF1Q92538 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
GBF1Q92538 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
GBF1Q92538 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
GBF1Q92538 AC021231.2-201ENST00000594613 730 ntBASIC29.48■■■□□ 2.31
GBF1Q92538 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
GBF1Q92538 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.48■■■□□ 2.31
GBF1Q92538 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
GBF1Q92538 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
GBF1Q92538 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
GBF1Q92538 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
GBF1Q92538 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.46■■■□□ 2.31
GBF1Q92538 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
GBF1Q92538 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
GBF1Q92538 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
GBF1Q92538 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.44■■■□□ 2.3
GBF1Q92538 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
GBF1Q92538 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
GBF1Q92538 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.4■■■□□ 2.3
GBF1Q92538 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.39■■■□□ 2.3
GBF1Q92538 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
GBF1Q92538 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.38■■■□□ 2.29
GBF1Q92538 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.38■■■□□ 2.29
GBF1Q92538 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
GBF1Q92538 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
GBF1Q92538 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms