Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.74■■□□□ 1.87
HMGCLL1Q8TB92 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.73■■□□□ 1.87
HMGCLL1Q8TB92 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.73■■□□□ 1.87
HMGCLL1Q8TB92 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
HMGCLL1Q8TB92 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
HMGCLL1Q8TB92 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HMGCLL1Q8TB92 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
HMGCLL1Q8TB92 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
HMGCLL1Q8TB92 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
HMGCLL1Q8TB92 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HMGCLL1Q8TB92 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HMGCLL1Q8TB92 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HMGCLL1Q8TB92 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HMGCLL1Q8TB92 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
HMGCLL1Q8TB92 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
HMGCLL1Q8TB92 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
HMGCLL1Q8TB92 SETD8P1-201ENST00000623146 1180 ntBASIC26.64■■□□□ 1.86
HMGCLL1Q8TB92 AC120057.4-201ENST00000624722 1615 ntBASIC26.64■■□□□ 1.85
HMGCLL1Q8TB92 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
HMGCLL1Q8TB92 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
HMGCLL1Q8TB92 ABCB10P1-201ENST00000614297 2181 ntBASIC26.63■■□□□ 1.85
HMGCLL1Q8TB92 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
HMGCLL1Q8TB92 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HMGCLL1Q8TB92 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.62■■□□□ 1.85
HMGCLL1Q8TB92 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
HMGCLL1Q8TB92 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.61■■□□□ 1.85
HMGCLL1Q8TB92 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCLL1Q8TB92 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HMGCLL1Q8TB92 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
HMGCLL1Q8TB92 AL133380.1-201ENST00000506013 324 ntBASIC26.6■■□□□ 1.85
HMGCLL1Q8TB92 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
HMGCLL1Q8TB92 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
HMGCLL1Q8TB92 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HMGCLL1Q8TB92 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HMGCLL1Q8TB92 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCLL1Q8TB92 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HMGCLL1Q8TB92 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HMGCLL1Q8TB92 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HMGCLL1Q8TB92 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.54■■□□□ 1.84
HMGCLL1Q8TB92 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.54■■□□□ 1.84
HMGCLL1Q8TB92 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HMGCLL1Q8TB92 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HMGCLL1Q8TB92 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
HMGCLL1Q8TB92 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
HMGCLL1Q8TB92 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HMGCLL1Q8TB92 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.5■■□□□ 1.83
HMGCLL1Q8TB92 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
HMGCLL1Q8TB92 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HMGCLL1Q8TB92 AC136428.2-201ENST00000563187 214 ntBASIC26.49■■□□□ 1.83
HMGCLL1Q8TB92 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
HMGCLL1Q8TB92 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
HMGCLL1Q8TB92 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.47■■□□□ 1.83
HMGCLL1Q8TB92 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
HMGCLL1Q8TB92 AC097358.2-201ENST00000607541 1159 ntBASIC26.47■■□□□ 1.83
HMGCLL1Q8TB92 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
HMGCLL1Q8TB92 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
HMGCLL1Q8TB92 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCLL1Q8TB92 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HMGCLL1Q8TB92 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
HMGCLL1Q8TB92 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.42■■□□□ 1.82
HMGCLL1Q8TB92 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.42■■□□□ 1.82
HMGCLL1Q8TB92 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.41■■□□□ 1.82
HMGCLL1Q8TB92 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HMGCLL1Q8TB92 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.41■■□□□ 1.82
HMGCLL1Q8TB92 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
HMGCLL1Q8TB92 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
HMGCLL1Q8TB92 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
HMGCLL1Q8TB92 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HMGCLL1Q8TB92 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HMGCLL1Q8TB92 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
HMGCLL1Q8TB92 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
HMGCLL1Q8TB92 ABCB10P3-201ENST00000561950 2166 ntBASIC26.38■■□□□ 1.81
HMGCLL1Q8TB92 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.37■■□□□ 1.81
HMGCLL1Q8TB92 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.37■■□□□ 1.81
HMGCLL1Q8TB92 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.36■■□□□ 1.81
HMGCLL1Q8TB92 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCLL1Q8TB92 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCLL1Q8TB92 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCLL1Q8TB92 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.36■■□□□ 1.81
HMGCLL1Q8TB92 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.35■■□□□ 1.81
HMGCLL1Q8TB92 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.35■■□□□ 1.81
HMGCLL1Q8TB92 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.35■■□□□ 1.81
HMGCLL1Q8TB92 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HMGCLL1Q8TB92 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
HMGCLL1Q8TB92 WASH5P-204ENST00000632292 975 ntBASIC26.33■■□□□ 1.81
HMGCLL1Q8TB92 CAHM-201ENST00000604200 896 ntBASIC26.32■■□□□ 1.8
HMGCLL1Q8TB92 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HMGCLL1Q8TB92 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
HMGCLL1Q8TB92 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
HMGCLL1Q8TB92 AL391121.1-201ENST00000607967 1349 ntBASIC26.3■■□□□ 1.8
HMGCLL1Q8TB92 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
HMGCLL1Q8TB92 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HMGCLL1Q8TB92 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
HMGCLL1Q8TB92 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
HMGCLL1Q8TB92 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
HMGCLL1Q8TB92 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HMGCLL1Q8TB92 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HMGCLL1Q8TB92 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HMGCLL1Q8TB92 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
HMGCLL1Q8TB92 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms