Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SIMC1Q8NDZ2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SIMC1Q8NDZ2 AL161658.1-201ENST00000623641 1967 ntBASIC25.52■■□□□ 1.68
SIMC1Q8NDZ2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.52■■□□□ 1.68
SIMC1Q8NDZ2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.68
SIMC1Q8NDZ2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.49■■□□□ 1.67
SIMC1Q8NDZ2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SIMC1Q8NDZ2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SIMC1Q8NDZ2 AL133380.1-201ENST00000506013 324 ntBASIC25.47■■□□□ 1.67
SIMC1Q8NDZ2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIMC1Q8NDZ2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIMC1Q8NDZ2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIMC1Q8NDZ2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SIMC1Q8NDZ2 SETD8P1-201ENST00000623146 1180 ntBASIC25.45■■□□□ 1.66
SIMC1Q8NDZ2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
SIMC1Q8NDZ2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SIMC1Q8NDZ2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SIMC1Q8NDZ2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SIMC1Q8NDZ2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SIMC1Q8NDZ2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SIMC1Q8NDZ2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
SIMC1Q8NDZ2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.39■■□□□ 1.66
SIMC1Q8NDZ2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SIMC1Q8NDZ2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SIMC1Q8NDZ2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SIMC1Q8NDZ2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SIMC1Q8NDZ2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.36■■□□□ 1.65
SIMC1Q8NDZ2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.34■■□□□ 1.65
SIMC1Q8NDZ2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SIMC1Q8NDZ2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SIMC1Q8NDZ2 AC136428.2-201ENST00000563187 214 ntBASIC25.33■■□□□ 1.65
SIMC1Q8NDZ2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SIMC1Q8NDZ2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SIMC1Q8NDZ2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
SIMC1Q8NDZ2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.31■■□□□ 1.64
SIMC1Q8NDZ2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.31■■□□□ 1.64
SIMC1Q8NDZ2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.3■■□□□ 1.64
SIMC1Q8NDZ2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SIMC1Q8NDZ2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SIMC1Q8NDZ2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.28■■□□□ 1.64
SIMC1Q8NDZ2 AC097358.2-201ENST00000607541 1159 ntBASIC25.28■■□□□ 1.64
SIMC1Q8NDZ2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SIMC1Q8NDZ2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.27■■□□□ 1.64
SIMC1Q8NDZ2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SIMC1Q8NDZ2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SIMC1Q8NDZ2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.26■■□□□ 1.63
SIMC1Q8NDZ2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.26■■□□□ 1.63
SIMC1Q8NDZ2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SIMC1Q8NDZ2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SIMC1Q8NDZ2 WASH5P-204ENST00000632292 975 ntBASIC25.25■■□□□ 1.63
SIMC1Q8NDZ2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
SIMC1Q8NDZ2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
SIMC1Q8NDZ2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SIMC1Q8NDZ2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.22■■□□□ 1.63
SIMC1Q8NDZ2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SIMC1Q8NDZ2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SIMC1Q8NDZ2 CAHM-201ENST00000604200 896 ntBASIC25.21■■□□□ 1.63
SIMC1Q8NDZ2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SIMC1Q8NDZ2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SIMC1Q8NDZ2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.19■■□□□ 1.62
SIMC1Q8NDZ2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SIMC1Q8NDZ2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SIMC1Q8NDZ2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SIMC1Q8NDZ2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
SIMC1Q8NDZ2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SIMC1Q8NDZ2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SIMC1Q8NDZ2 AL391121.1-201ENST00000607967 1349 ntBASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SIMC1Q8NDZ2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.11■■□□□ 1.61
SIMC1Q8NDZ2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SIMC1Q8NDZ2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SIMC1Q8NDZ2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
SIMC1Q8NDZ2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.1■■□□□ 1.61
SIMC1Q8NDZ2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SIMC1Q8NDZ2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SIMC1Q8NDZ2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.08■■□□□ 1.61
SIMC1Q8NDZ2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SIMC1Q8NDZ2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SIMC1Q8NDZ2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SIMC1Q8NDZ2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
SIMC1Q8NDZ2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SIMC1Q8NDZ2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SIMC1Q8NDZ2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.06■■□□□ 1.6
SIMC1Q8NDZ2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.06■■□□□ 1.6
SIMC1Q8NDZ2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SIMC1Q8NDZ2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SIMC1Q8NDZ2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SIMC1Q8NDZ2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SIMC1Q8NDZ2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SIMC1Q8NDZ2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SIMC1Q8NDZ2 SUZ12P1-203ENST00000578195 985 ntBASIC25.03■■□□□ 1.6
SIMC1Q8NDZ2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SIMC1Q8NDZ2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SIMC1Q8NDZ2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIMC1Q8NDZ2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms