Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SIMC1Q8NDZ2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SIMC1Q8NDZ2 AL161658.1-201ENST00000623641 1967 ntBASIC25.52■■□□□ 1.68
SIMC1Q8NDZ2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.52■■□□□ 1.68
SIMC1Q8NDZ2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.68
SIMC1Q8NDZ2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.49■■□□□ 1.67
SIMC1Q8NDZ2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SIMC1Q8NDZ2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SIMC1Q8NDZ2 AL133380.1-201ENST00000506013 324 ntBASIC25.47■■□□□ 1.67
SIMC1Q8NDZ2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIMC1Q8NDZ2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIMC1Q8NDZ2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIMC1Q8NDZ2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SIMC1Q8NDZ2 SETD8P1-201ENST00000623146 1180 ntBASIC25.45■■□□□ 1.66
SIMC1Q8NDZ2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
SIMC1Q8NDZ2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SIMC1Q8NDZ2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SIMC1Q8NDZ2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SIMC1Q8NDZ2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SIMC1Q8NDZ2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SIMC1Q8NDZ2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
SIMC1Q8NDZ2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.39■■□□□ 1.66
SIMC1Q8NDZ2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SIMC1Q8NDZ2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SIMC1Q8NDZ2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SIMC1Q8NDZ2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SIMC1Q8NDZ2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.36■■□□□ 1.65
SIMC1Q8NDZ2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.34■■□□□ 1.65
SIMC1Q8NDZ2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SIMC1Q8NDZ2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SIMC1Q8NDZ2 AC136428.2-201ENST00000563187 214 ntBASIC25.33■■□□□ 1.65
SIMC1Q8NDZ2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SIMC1Q8NDZ2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SIMC1Q8NDZ2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
SIMC1Q8NDZ2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.31■■□□□ 1.64
SIMC1Q8NDZ2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.31■■□□□ 1.64
SIMC1Q8NDZ2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.3■■□□□ 1.64
SIMC1Q8NDZ2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SIMC1Q8NDZ2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SIMC1Q8NDZ2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.28■■□□□ 1.64
SIMC1Q8NDZ2 AC097358.2-201ENST00000607541 1159 ntBASIC25.28■■□□□ 1.64
SIMC1Q8NDZ2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SIMC1Q8NDZ2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.27■■□□□ 1.64
SIMC1Q8NDZ2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SIMC1Q8NDZ2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SIMC1Q8NDZ2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.26■■□□□ 1.63
SIMC1Q8NDZ2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.26■■□□□ 1.63
SIMC1Q8NDZ2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SIMC1Q8NDZ2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SIMC1Q8NDZ2 WASH5P-204ENST00000632292 975 ntBASIC25.25■■□□□ 1.63
SIMC1Q8NDZ2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
SIMC1Q8NDZ2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
SIMC1Q8NDZ2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SIMC1Q8NDZ2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.22■■□□□ 1.63
SIMC1Q8NDZ2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SIMC1Q8NDZ2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SIMC1Q8NDZ2 CAHM-201ENST00000604200 896 ntBASIC25.21■■□□□ 1.63
SIMC1Q8NDZ2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SIMC1Q8NDZ2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SIMC1Q8NDZ2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.19■■□□□ 1.62
SIMC1Q8NDZ2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SIMC1Q8NDZ2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SIMC1Q8NDZ2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SIMC1Q8NDZ2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
SIMC1Q8NDZ2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SIMC1Q8NDZ2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SIMC1Q8NDZ2 AL391121.1-201ENST00000607967 1349 ntBASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
SIMC1Q8NDZ2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SIMC1Q8NDZ2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.11■■□□□ 1.61
SIMC1Q8NDZ2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SIMC1Q8NDZ2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SIMC1Q8NDZ2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
SIMC1Q8NDZ2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.1■■□□□ 1.61
SIMC1Q8NDZ2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SIMC1Q8NDZ2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SIMC1Q8NDZ2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.08■■□□□ 1.61
SIMC1Q8NDZ2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SIMC1Q8NDZ2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SIMC1Q8NDZ2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SIMC1Q8NDZ2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
SIMC1Q8NDZ2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SIMC1Q8NDZ2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SIMC1Q8NDZ2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.06■■□□□ 1.6
SIMC1Q8NDZ2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.06■■□□□ 1.6
SIMC1Q8NDZ2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SIMC1Q8NDZ2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SIMC1Q8NDZ2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SIMC1Q8NDZ2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SIMC1Q8NDZ2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SIMC1Q8NDZ2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SIMC1Q8NDZ2 SUZ12P1-203ENST00000578195 985 ntBASIC25.03■■□□□ 1.6
SIMC1Q8NDZ2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SIMC1Q8NDZ2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SIMC1Q8NDZ2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIMC1Q8NDZ2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms