Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC116Q8IYX3 RARRES2P7-201ENST00000567349 469 ntBASIC25.55■■□□□ 1.68
CCDC116Q8IYX3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC116Q8IYX3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC116Q8IYX3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CCDC116Q8IYX3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC116Q8IYX3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC116Q8IYX3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.52■■□□□ 1.68
CCDC116Q8IYX3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC116Q8IYX3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.51■■□□□ 1.67
CCDC116Q8IYX3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.51■■□□□ 1.67
CCDC116Q8IYX3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC116Q8IYX3 AL133380.1-201ENST00000506013 324 ntBASIC25.5■■□□□ 1.67
CCDC116Q8IYX3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC116Q8IYX3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC116Q8IYX3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC116Q8IYX3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.47■■□□□ 1.67
CCDC116Q8IYX3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC116Q8IYX3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC116Q8IYX3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC116Q8IYX3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.45■■□□□ 1.66
CCDC116Q8IYX3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC116Q8IYX3 SETD8P1-201ENST00000623146 1180 ntBASIC25.44■■□□□ 1.66
CCDC116Q8IYX3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC116Q8IYX3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC116Q8IYX3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC116Q8IYX3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.41■■□□□ 1.66
CCDC116Q8IYX3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
CCDC116Q8IYX3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC116Q8IYX3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC116Q8IYX3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC116Q8IYX3 WASH5P-204ENST00000632292 975 ntBASIC25.37■■□□□ 1.65
CCDC116Q8IYX3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC116Q8IYX3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
CCDC116Q8IYX3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CCDC116Q8IYX3 AL161658.1-201ENST00000623641 1967 ntBASIC25.35■■□□□ 1.65
CCDC116Q8IYX3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC116Q8IYX3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC116Q8IYX3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CCDC116Q8IYX3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC116Q8IYX3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC116Q8IYX3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CCDC116Q8IYX3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
CCDC116Q8IYX3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC116Q8IYX3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC116Q8IYX3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC116Q8IYX3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC116Q8IYX3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC116Q8IYX3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC116Q8IYX3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC116Q8IYX3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC116Q8IYX3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC116Q8IYX3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.28■■□□□ 1.64
CCDC116Q8IYX3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC116Q8IYX3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC116Q8IYX3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CCDC116Q8IYX3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC116Q8IYX3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
CCDC116Q8IYX3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.25■■□□□ 1.63
CCDC116Q8IYX3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC116Q8IYX3 AC097358.2-201ENST00000607541 1159 ntBASIC25.24■■□□□ 1.63
CCDC116Q8IYX3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC116Q8IYX3 AC136428.2-201ENST00000563187 214 ntBASIC25.22■■□□□ 1.63
CCDC116Q8IYX3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC116Q8IYX3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CCDC116Q8IYX3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC116Q8IYX3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC116Q8IYX3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC116Q8IYX3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC116Q8IYX3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.19■■□□□ 1.62
CCDC116Q8IYX3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC116Q8IYX3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC116Q8IYX3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCDC116Q8IYX3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCDC116Q8IYX3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CCDC116Q8IYX3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CCDC116Q8IYX3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CCDC116Q8IYX3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.17■■□□□ 1.62
CCDC116Q8IYX3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC116Q8IYX3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC116Q8IYX3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.16■■□□□ 1.62
CCDC116Q8IYX3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC116Q8IYX3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC116Q8IYX3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CCDC116Q8IYX3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.15■■□□□ 1.62
CCDC116Q8IYX3 ABCB10P1-201ENST00000614297 2181 ntBASIC25.15■■□□□ 1.62
CCDC116Q8IYX3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CCDC116Q8IYX3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.14■■□□□ 1.62
CCDC116Q8IYX3 CAHM-201ENST00000604200 896 ntBASIC25.14■■□□□ 1.62
CCDC116Q8IYX3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC116Q8IYX3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC116Q8IYX3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
CCDC116Q8IYX3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CCDC116Q8IYX3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC116Q8IYX3 AL391121.1-201ENST00000607967 1349 ntBASIC25.12■■□□□ 1.61
CCDC116Q8IYX3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC116Q8IYX3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC116Q8IYX3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC116Q8IYX3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC116Q8IYX3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms