Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
CCDC146Q8IYE0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
CCDC146Q8IYE0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC36.17■■■■□ 3.38
CCDC146Q8IYE0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC36.14■■■■□ 3.38
CCDC146Q8IYE0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.12■■■■□ 3.37
CCDC146Q8IYE0 CAHM-201ENST00000604200 896 ntBASIC36.12■■■■□ 3.37
CCDC146Q8IYE0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
CCDC146Q8IYE0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC36.1■■■■□ 3.37
CCDC146Q8IYE0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
CCDC146Q8IYE0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC36.09■■■■□ 3.37
CCDC146Q8IYE0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
CCDC146Q8IYE0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
CCDC146Q8IYE0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
CCDC146Q8IYE0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC36.06■■■■□ 3.36
CCDC146Q8IYE0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
CCDC146Q8IYE0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CCDC146Q8IYE0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC36.05■■■■□ 3.36
CCDC146Q8IYE0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
CCDC146Q8IYE0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC36.04■■■■□ 3.36
CCDC146Q8IYE0 WASH5P-204ENST00000632292 975 ntBASIC36.04■■■■□ 3.36
CCDC146Q8IYE0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
CCDC146Q8IYE0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
CCDC146Q8IYE0 AL391121.1-201ENST00000607967 1349 ntBASIC36■■■■□ 3.35
CCDC146Q8IYE0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
CCDC146Q8IYE0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC35.97■■■■□ 3.35
CCDC146Q8IYE0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC35.96■■■■□ 3.35
CCDC146Q8IYE0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC35.96■■■■□ 3.35
CCDC146Q8IYE0 SUZ12P1-203ENST00000578195 985 ntBASIC35.95■■■■□ 3.35
CCDC146Q8IYE0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC35.95■■■■□ 3.35
CCDC146Q8IYE0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC35.94■■■■□ 3.34
CCDC146Q8IYE0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
CCDC146Q8IYE0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
CCDC146Q8IYE0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC35.94■■■■□ 3.34
CCDC146Q8IYE0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CCDC146Q8IYE0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
CCDC146Q8IYE0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CCDC146Q8IYE0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CCDC146Q8IYE0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC35.91■■■■□ 3.34
CCDC146Q8IYE0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC35.91■■■■□ 3.34
CCDC146Q8IYE0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CCDC146Q8IYE0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CCDC146Q8IYE0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
CCDC146Q8IYE0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
CCDC146Q8IYE0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CCDC146Q8IYE0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC35.88■■■■□ 3.33
CCDC146Q8IYE0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
CCDC146Q8IYE0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC35.85■■■■□ 3.33
CCDC146Q8IYE0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC35.84■■■■□ 3.33
CCDC146Q8IYE0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC35.84■■■■□ 3.33
CCDC146Q8IYE0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CCDC146Q8IYE0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
CCDC146Q8IYE0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
CCDC146Q8IYE0 AL161658.1-201ENST00000623641 1967 ntBASIC35.8■■■■□ 3.32
CCDC146Q8IYE0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
CCDC146Q8IYE0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CCDC146Q8IYE0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC35.75■■■■□ 3.31
CCDC146Q8IYE0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
CCDC146Q8IYE0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CCDC146Q8IYE0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC35.73■■■■□ 3.31
CCDC146Q8IYE0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC35.73■■■■□ 3.31
CCDC146Q8IYE0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC35.72■■■■□ 3.31
CCDC146Q8IYE0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC35.72■■■■□ 3.31
CCDC146Q8IYE0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CCDC146Q8IYE0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC35.71■■■■□ 3.31
CCDC146Q8IYE0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
CCDC146Q8IYE0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC35.71■■■■□ 3.31
CCDC146Q8IYE0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
CCDC146Q8IYE0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.31
CCDC146Q8IYE0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CCDC146Q8IYE0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC35.69■■■■□ 3.3
CCDC146Q8IYE0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CCDC146Q8IYE0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC35.68■■■■□ 3.3
CCDC146Q8IYE0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.67■■■■□ 3.3
CCDC146Q8IYE0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC35.67■■■■□ 3.3
CCDC146Q8IYE0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CCDC146Q8IYE0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CCDC146Q8IYE0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CCDC146Q8IYE0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CCDC146Q8IYE0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CCDC146Q8IYE0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC35.62■■■■□ 3.29
CCDC146Q8IYE0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC35.62■■■■□ 3.29
CCDC146Q8IYE0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CCDC146Q8IYE0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC35.61■■■■□ 3.29
CCDC146Q8IYE0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CCDC146Q8IYE0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
CCDC146Q8IYE0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CCDC146Q8IYE0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC35.57■■■■□ 3.29
CCDC146Q8IYE0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.57■■■■□ 3.28
CCDC146Q8IYE0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
CCDC146Q8IYE0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.56■■■■□ 3.28
CCDC146Q8IYE0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CCDC146Q8IYE0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CCDC146Q8IYE0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CCDC146Q8IYE0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CCDC146Q8IYE0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC35.53■■■■□ 3.28
CCDC146Q8IYE0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CCDC146Q8IYE0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC35.52■■■■□ 3.28
CCDC146Q8IYE0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CCDC146Q8IYE0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
CCDC146Q8IYE0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC35.5■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms