Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZFHX4Q86UP3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
ZFHX4Q86UP3 AC016575.1-201ENST00000607026 382 ntBASIC26.23■■□□□ 1.79
ZFHX4Q86UP3 MIR3648-2-201ENST00000581792 180 ntBASIC26.23■■□□□ 1.79
ZFHX4Q86UP3 MIR3648-1-201ENST00000615959 180 ntBASIC26.23■■□□□ 1.79
ZFHX4Q86UP3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
ZFHX4Q86UP3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.22■■□□□ 1.79
ZFHX4Q86UP3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.22■■□□□ 1.79
ZFHX4Q86UP3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZFHX4Q86UP3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.21■■□□□ 1.79
ZFHX4Q86UP3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.21■■□□□ 1.79
ZFHX4Q86UP3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ZFHX4Q86UP3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.2■■□□□ 1.79
ZFHX4Q86UP3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ZFHX4Q86UP3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZFHX4Q86UP3 RARRES2P2-201ENST00000394842 485 ntBASIC26.17■■□□□ 1.78
ZFHX4Q86UP3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
ZFHX4Q86UP3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ZFHX4Q86UP3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFHX4Q86UP3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFHX4Q86UP3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFHX4Q86UP3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFHX4Q86UP3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
ZFHX4Q86UP3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ZFHX4Q86UP3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
ZFHX4Q86UP3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZFHX4Q86UP3 CR559946.2-201ENST00000623684 991 ntBASIC26.13■■□□□ 1.77
ZFHX4Q86UP3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.13■■□□□ 1.77
ZFHX4Q86UP3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.11■■□□□ 1.77
ZFHX4Q86UP3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.1■■□□□ 1.77
ZFHX4Q86UP3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZFHX4Q86UP3 AC019069.1-201ENST00000610008 1333 ntBASIC26.1■■□□□ 1.77
ZFHX4Q86UP3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZFHX4Q86UP3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.1■■□□□ 1.77
ZFHX4Q86UP3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ZFHX4Q86UP3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.09■■□□□ 1.77
ZFHX4Q86UP3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.08■■□□□ 1.77
ZFHX4Q86UP3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.07■■□□□ 1.76
ZFHX4Q86UP3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.07■■□□□ 1.76
ZFHX4Q86UP3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.06■■□□□ 1.76
ZFHX4Q86UP3 ABHD17AP5-201ENST00000580133 923 ntBASIC26.06■■□□□ 1.76
ZFHX4Q86UP3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.06■■□□□ 1.76
ZFHX4Q86UP3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.06■■□□□ 1.76
ZFHX4Q86UP3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.06■■□□□ 1.76
ZFHX4Q86UP3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
ZFHX4Q86UP3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.05■■□□□ 1.76
ZFHX4Q86UP3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ZFHX4Q86UP3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ZFHX4Q86UP3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
ZFHX4Q86UP3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZFHX4Q86UP3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.02■■□□□ 1.76
ZFHX4Q86UP3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZFHX4Q86UP3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
ZFHX4Q86UP3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
ZFHX4Q86UP3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26■■□□□ 1.75
ZFHX4Q86UP3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZFHX4Q86UP3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
ZFHX4Q86UP3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.99■■□□□ 1.75
ZFHX4Q86UP3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
ZFHX4Q86UP3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZFHX4Q86UP3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZFHX4Q86UP3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.92■■□□□ 1.74
ZFHX4Q86UP3 DUX4L29-201ENST00000425409 679 ntBASIC25.91■■□□□ 1.74
ZFHX4Q86UP3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZFHX4Q86UP3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.91■■□□□ 1.74
ZFHX4Q86UP3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZFHX4Q86UP3 AC021231.2-201ENST00000594613 730 ntBASIC25.9■■□□□ 1.74
ZFHX4Q86UP3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
ZFHX4Q86UP3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.89■■□□□ 1.73
ZFHX4Q86UP3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZFHX4Q86UP3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZFHX4Q86UP3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.87■■□□□ 1.73
ZFHX4Q86UP3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.87■■□□□ 1.73
ZFHX4Q86UP3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
ZFHX4Q86UP3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ZFHX4Q86UP3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
ZFHX4Q86UP3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZFHX4Q86UP3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZFHX4Q86UP3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.84■■□□□ 1.73
ZFHX4Q86UP3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZFHX4Q86UP3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.82■■□□□ 1.72
ZFHX4Q86UP3 AL592295.1-201ENST00000400984 884 ntBASIC25.82■■□□□ 1.72
ZFHX4Q86UP3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZFHX4Q86UP3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZFHX4Q86UP3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ZFHX4Q86UP3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZFHX4Q86UP3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZFHX4Q86UP3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ZFHX4Q86UP3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZFHX4Q86UP3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.77■■□□□ 1.72
ZFHX4Q86UP3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ZFHX4Q86UP3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.76■■□□□ 1.71
ZFHX4Q86UP3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.76■■□□□ 1.71
ZFHX4Q86UP3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ZFHX4Q86UP3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ZFHX4Q86UP3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZFHX4Q86UP3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ZFHX4Q86UP3 AC018358.1-201ENST00000631079 1402 ntBASIC25.74■■□□□ 1.71
ZFHX4Q86UP3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZFHX4Q86UP3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms