Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SCXQ7RTU7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCXQ7RTU7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SCXQ7RTU7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.6■□□□□ 0.41
SCXQ7RTU7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCXQ7RTU7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCXQ7RTU7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCXQ7RTU7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.58■□□□□ 0.4
SCXQ7RTU7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCXQ7RTU7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.56■□□□□ 0.4
SCXQ7RTU7 AL162393.1-201ENST00000437852 946 ntBASIC17.56■□□□□ 0.4
SCXQ7RTU7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCXQ7RTU7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCXQ7RTU7 AP006261.1-201ENST00000584783 668 ntBASIC17.55■□□□□ 0.4
SCXQ7RTU7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCXQ7RTU7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCXQ7RTU7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.53■□□□□ 0.4
SCXQ7RTU7 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.53■□□□□ 0.4
SCXQ7RTU7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.52■□□□□ 0.4
SCXQ7RTU7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC17.51■□□□□ 0.39
SCXQ7RTU7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.51■□□□□ 0.39
SCXQ7RTU7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SCXQ7RTU7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.5■□□□□ 0.39
SCXQ7RTU7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCXQ7RTU7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCXQ7RTU7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCXQ7RTU7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCXQ7RTU7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCXQ7RTU7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCXQ7RTU7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCXQ7RTU7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCXQ7RTU7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCXQ7RTU7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCXQ7RTU7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCXQ7RTU7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCXQ7RTU7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCXQ7RTU7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCXQ7RTU7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.46■□□□□ 0.39
SCXQ7RTU7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCXQ7RTU7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCXQ7RTU7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCXQ7RTU7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCXQ7RTU7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SCXQ7RTU7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.45■□□□□ 0.38
SCXQ7RTU7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCXQ7RTU7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCXQ7RTU7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCXQ7RTU7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.42■□□□□ 0.38
SCXQ7RTU7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCXQ7RTU7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
SCXQ7RTU7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.42■□□□□ 0.38
SCXQ7RTU7 MIR3665-201ENST00000578708 105 ntBASIC17.42■□□□□ 0.38
SCXQ7RTU7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCXQ7RTU7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCXQ7RTU7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCXQ7RTU7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCXQ7RTU7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCXQ7RTU7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC17.4■□□□□ 0.38
SCXQ7RTU7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCXQ7RTU7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.4■□□□□ 0.38
SCXQ7RTU7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCXQ7RTU7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCXQ7RTU7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SCXQ7RTU7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCXQ7RTU7 MIR762-201ENST00000390236 83 ntBASIC17.38■□□□□ 0.37
SCXQ7RTU7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCXQ7RTU7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SCXQ7RTU7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCXQ7RTU7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCXQ7RTU7 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.37■□□□□ 0.37
SCXQ7RTU7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCXQ7RTU7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCXQ7RTU7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SCXQ7RTU7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCXQ7RTU7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.36■□□□□ 0.37
SCXQ7RTU7 DUX4L28-201ENST00000623687 678 ntBASIC17.36■□□□□ 0.37
SCXQ7RTU7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SCXQ7RTU7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.35■□□□□ 0.37
SCXQ7RTU7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCXQ7RTU7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCXQ7RTU7 AC005559.1-201ENST00000589661 871 ntBASIC17.34■□□□□ 0.37
SCXQ7RTU7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCXQ7RTU7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCXQ7RTU7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCXQ7RTU7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCXQ7RTU7 AC087741.3-201ENST00000624270 1347 ntBASIC17.33■□□□□ 0.36
SCXQ7RTU7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCXQ7RTU7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCXQ7RTU7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.31■□□□□ 0.36
SCXQ7RTU7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.31■□□□□ 0.36
SCXQ7RTU7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.31■□□□□ 0.36
SCXQ7RTU7 WASH5P-204ENST00000632292 975 ntBASIC17.31■□□□□ 0.36
SCXQ7RTU7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCXQ7RTU7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC17.3■□□□□ 0.36
SCXQ7RTU7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCXQ7RTU7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.3■□□□□ 0.36
SCXQ7RTU7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCXQ7RTU7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCXQ7RTU7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCXQ7RTU7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms