Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 WASH5P-204ENST00000632292 975 ntBASIC14.7□□□□□ -0.06
SEC61BP60468 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61BP60468 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61BP60468 MIR7108-201ENST00000614319 87 ntBASIC14.69□□□□□ -0.06
SEC61BP60468 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61BP60468 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61BP60468 RPS2-209ENST00000529806 993 ntTSL 3 BASIC14.68□□□□□ -0.06
SEC61BP60468 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61BP60468 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61BP60468 BOD1-206ENST00000480951 814 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC61BP60468 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
SEC61BP60468 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SEC61BP60468 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61BP60468 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61BP60468 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61BP60468 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SEC61BP60468 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61BP60468 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61BP60468 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SEC61BP60468 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SEC61BP60468 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC14.63□□□□□ -0.07
SEC61BP60468 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC14.63□□□□□ -0.07
SEC61BP60468 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SEC61BP60468 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC14.62□□□□□ -0.07
SEC61BP60468 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61BP60468 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61BP60468 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61BP60468 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC14.61□□□□□ -0.07
SEC61BP60468 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61BP60468 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61BP60468 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61BP60468 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SEC61BP60468 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SEC61BP60468 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC14.59□□□□□ -0.07
SEC61BP60468 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61BP60468 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61BP60468 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61BP60468 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SEC61BP60468 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SEC61BP60468 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SEC61BP60468 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SEC61BP60468 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.58□□□□□ -0.08
SEC61BP60468 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC14.58□□□□□ -0.08
SEC61BP60468 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC14.58□□□□□ -0.08
SEC61BP60468 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61BP60468 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61BP60468 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC61BP60468 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61BP60468 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61BP60468 HLA-V-202ENST00000446817 847 ntBASIC14.55□□□□□ -0.08
SEC61BP60468 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61BP60468 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61BP60468 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SEC61BP60468 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC61BP60468 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SEC61BP60468 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SEC61BP60468 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC14.53□□□□□ -0.08
SEC61BP60468 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC14.53□□□□□ -0.08
SEC61BP60468 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SEC61BP60468 DUX4L29-201ENST00000425409 679 ntBASIC14.53□□□□□ -0.08
SEC61BP60468 ZNRF2P2-203ENST00000454624 420 ntBASIC14.53□□□□□ -0.08
SEC61BP60468 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC14.53□□□□□ -0.08
SEC61BP60468 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SEC61BP60468 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SEC61BP60468 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61BP60468 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61BP60468 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61BP60468 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC14.49□□□□□ -0.09
SEC61BP60468 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61BP60468 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61BP60468 AC108673.1-201ENST00000510422 1159 ntBASIC14.49□□□□□ -0.09
SEC61BP60468 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.49□□□□□ -0.09
SEC61BP60468 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61BP60468 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC14.49□□□□□ -0.09
SEC61BP60468 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61BP60468 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61BP60468 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC14.48□□□□□ -0.09
SEC61BP60468 HGH1-207ENST00000628266 258 ntTSL 5 BASIC14.48□□□□□ -0.09
SEC61BP60468 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61BP60468 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61BP60468 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61BP60468 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61BP60468 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC14.47□□□□□ -0.09
SEC61BP60468 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SEC61BP60468 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61BP60468 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SEC61BP60468 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC14.46□□□□□ -0.09
SEC61BP60468 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC14.46□□□□□ -0.09
SEC61BP60468 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SEC61BP60468 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61BP60468 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61BP60468 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61BP60468 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC61BP60468 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC61BP60468 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61BP60468 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61BP60468 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SEC61BP60468 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61BP60468 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61BP60468 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms