Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
PDE1AP54750 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
PDE1AP54750 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
PDE1AP54750 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC33.39■■■□□ 2.93
PDE1AP54750 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
PDE1AP54750 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC33.37■■■□□ 2.93
PDE1AP54750 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
PDE1AP54750 AL133380.1-201ENST00000506013 324 ntBASIC33.32■■■□□ 2.92
PDE1AP54750 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
PDE1AP54750 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
PDE1AP54750 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
PDE1AP54750 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.3■■■□□ 2.92
PDE1AP54750 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
PDE1AP54750 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC33.27■■■□□ 2.92
PDE1AP54750 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC33.26■■■□□ 2.92
PDE1AP54750 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.25■■■□□ 2.91
PDE1AP54750 RARRES2P7-201ENST00000567349 469 ntBASIC33.25■■■□□ 2.91
PDE1AP54750 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.24■■■□□ 2.91
PDE1AP54750 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
PDE1AP54750 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC33.24■■■□□ 2.91
PDE1AP54750 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC33.24■■■□□ 2.91
PDE1AP54750 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
PDE1AP54750 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
PDE1AP54750 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC33.21■■■□□ 2.91
PDE1AP54750 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
PDE1AP54750 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.17■■■□□ 2.9
PDE1AP54750 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC33.17■■■□□ 2.9
PDE1AP54750 SETD8P1-201ENST00000623146 1180 ntBASIC33.16■■■□□ 2.9
PDE1AP54750 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
PDE1AP54750 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
PDE1AP54750 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
PDE1AP54750 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC33.14■■■□□ 2.9
PDE1AP54750 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.14■■■□□ 2.89
PDE1AP54750 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PDE1AP54750 WASH5P-204ENST00000632292 975 ntBASIC33.13■■■□□ 2.89
PDE1AP54750 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC33.12■■■□□ 2.89
PDE1AP54750 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
PDE1AP54750 AL161658.1-201ENST00000623641 1967 ntBASIC33.11■■■□□ 2.89
PDE1AP54750 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
PDE1AP54750 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
PDE1AP54750 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
PDE1AP54750 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
PDE1AP54750 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PDE1AP54750 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
PDE1AP54750 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
PDE1AP54750 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC33.05■■■□□ 2.88
PDE1AP54750 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC33.02■■■□□ 2.88
PDE1AP54750 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
PDE1AP54750 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
PDE1AP54750 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC33.02■■■□□ 2.88
PDE1AP54750 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC33.01■■■□□ 2.88
PDE1AP54750 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
PDE1AP54750 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.99■■■□□ 2.87
PDE1AP54750 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
PDE1AP54750 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PDE1AP54750 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PDE1AP54750 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PDE1AP54750 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
PDE1AP54750 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
PDE1AP54750 AC136428.2-201ENST00000563187 214 ntBASIC32.96■■■□□ 2.87
PDE1AP54750 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.96■■■□□ 2.87
PDE1AP54750 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PDE1AP54750 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
PDE1AP54750 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
PDE1AP54750 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
PDE1AP54750 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.94■■■□□ 2.86
PDE1AP54750 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.93■■■□□ 2.86
PDE1AP54750 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
PDE1AP54750 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
PDE1AP54750 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
PDE1AP54750 ABCB10P1-201ENST00000614297 2181 ntBASIC32.89■■■□□ 2.86
PDE1AP54750 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
PDE1AP54750 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
PDE1AP54750 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
PDE1AP54750 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
PDE1AP54750 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
PDE1AP54750 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.87■■■□□ 2.85
PDE1AP54750 AC097358.2-201ENST00000607541 1159 ntBASIC32.87■■■□□ 2.85
PDE1AP54750 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
PDE1AP54750 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
PDE1AP54750 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.86■■■□□ 2.85
PDE1AP54750 CAHM-201ENST00000604200 896 ntBASIC32.86■■■□□ 2.85
PDE1AP54750 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
PDE1AP54750 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PDE1AP54750 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
PDE1AP54750 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
PDE1AP54750 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.83■■■□□ 2.85
PDE1AP54750 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
PDE1AP54750 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
PDE1AP54750 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.82■■■□□ 2.84
PDE1AP54750 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.82■■■□□ 2.84
PDE1AP54750 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
PDE1AP54750 AL391121.1-201ENST00000607967 1349 ntBASIC32.81■■■□□ 2.84
PDE1AP54750 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.81■■■□□ 2.84
PDE1AP54750 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
PDE1AP54750 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
PDE1AP54750 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
PDE1AP54750 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
PDE1AP54750 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
PDE1AP54750 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.77■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms